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NECEvent2014_3_5_scaffold_607_4

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: 4262..4813

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 179.0
  • Bit_score: 204
  • Evalue 2.30e-50
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1128398 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 179.0
  • Bit_score: 204
  • Evalue 1.10e-49
2'-5' RNA ligase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWL2_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 179.0
  • Bit_score: 204
  • Evalue 8.20e-50

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCGTGTTTTTTTAGCTATAGAGTTTACAGAAGAAGTAAAGGAATACTTATATAAAATACAGCAGATAGTTAAGAACCATAGTAGTGCAGGTAATTTTACTAGCAAAGAAAATTTTCATTTAACACTTCGATTTATTGGTGAAGTGAAGGAGCATGAGCTAAATAAATTAAAAGAGATTATTAATTATATATCATTAAATCGAGAAATTTTTCAAATAGTTTTTAAAGAACTTGGAGAATTCCCTAGGAAAAATAAAAAAATAATTTGGATAGGATTACAACAGAATAAGGAATTAGATTTATTATATTCTAATTTAGAAGATAGGTTAGAATTTTATGAATATCCAAAGGAAGAAAGAAGGTTTGTTCCACATATAACTTTAGGCAGAGAAATAATCCTTACAGAAGAATTTAATAATATAAAAAATTCGATTGAAATTGATAAAGTAAAAATGACTGTAAATAAGATTTCCATTATGGAGAGTACAAGAAAAAATGGTCAATTAACTTATATTCCAATTTATGTAAAACAATTTAAATCCAAGTGCTAG
PROTEIN sequence
Length: 184
MRVFLAIEFTEEVKEYLYKIQQIVKNHSSAGNFTSKENFHLTLRFIGEVKEHELNKLKEIINYISLNREIFQIVFKELGEFPRKNKKIIWIGLQQNKELDLLYSNLEDRLEFYEYPKEERRFVPHITLGREIILTEEFNNIKNSIEIDKVKMTVNKISIMESTRKNGQLTYIPIYVKQFKSKC*