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NECEvent2014_3_5_scaffold_2238_1

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: 138..698

Top 3 Functional Annotations

Value Algorithm Source
rpoD7; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 187.0
  • Bit_score: 245
  • Evalue 9.10e-63
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z092_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 186.0
  • Bit_score: 272
  • Evalue 2.50e-70
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCQ96235.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 186.0
  • Bit_score: 272
  • Evalue 3.50e-70

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
ATGTATCGACTGACTTTAGTGGATACCCTCAATGCAGAAAAGACTAAAGAAAATATATATAATCAACAAGACTTTTCTTATATTTTTGAAGCTTATTATAAAAGGGTGTATAACTTCATATATTATCAGGTTAGTTGCCATTATGCAGCAGAAGATTTGACTAGTCAGGTATTCTTAAAAGCAATGGTCAATATAGAGAAATATTCTAAGGACAAATCACCCTTTGAAGTTTGGATTTTTGCTATAGCTAAGAACATAGTAAATGATTATTTTAGAAGTATAAAAAAATATAATATTTTTTCTATTGATGGAGTTAAGGAATTAATATCAAAGATGAAAACACCAGAAGAAATAGTAGAGGTTTCAGAAACAAATGATGAGTTGTTAAAGGCATTGAGGAGATTGAATACAAGGGAAAAAAGTATTGTATCACTTAAATTTGGAGCAGAGCTGAAGAACAGAGAGATTGCAGAAATATTGGGTCTTACAGAAAACAATGTAGGTATAATACTTTATAGAACAATGAAAAAACTAAAAAAGGAATTGGAGAAGGAGGAATAA
PROTEIN sequence
Length: 187
MYRLTLVDTLNAEKTKENIYNQQDFSYIFEAYYKRVYNFIYYQVSCHYAAEDLTSQVFLKAMVNIEKYSKDKSPFEVWIFAIAKNIVNDYFRSIKKYNIFSIDGVKELISKMKTPEEIVEVSETNDELLKALRRLNTREKSIVSLKFGAELKNREIAEILGLTENNVGIILYRTMKKLKKELEKEE*