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NECEvent2014_3_5_scaffold_559_5

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 6185..7363

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 392.0
  • Bit_score: 773
  • Evalue 1.30e-220
ispC; IspC 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 392.0
  • Bit_score: 770
  • Evalue 2.20e-220
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q5J4_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 392.0
  • Bit_score: 770
  • Evalue 8.00e-220
  • rbh

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCAGACTTCAACAGTCGTAATTCTTGGATCCACCGGTTCCATCGGCACGCAGGGCCTCGACGTCATCTCACGCCATCCCGATCGCTTCGACGTGGTCGGTTTGGCGGCCGGCGGTGCGCATGTGGACCTGCTTGCCCGGCAGGCCGCGCAATTTCACGTTTCAAGCGTGGCCGTGTTCGACGAGCATGCCGTGCAACCGTTGCGTGATGCTCTGGCACAGGCGGGAGCTGCACATGTCGAAGTGACCGCCGGCCCCGAAGCCGTGGTGAATATGGCCGGTTCCGGTGCCGATGTGGTACTCAACGGCATTACCGGTTCGATTGGTCTTGAGCCGTCCATTGCGGCGCTGCGGTCCGGCTCCCAGCTTGCATTGGCGAACAAGGAATCCGTGGTGGCCGGCGGTCACCTGCTGTTCGACGCGCAGGTTCGTGCGCAGCAGATCAACCCGGTCGATTCCGAACATTCCGCCATCTGGCAGTCGCTGCGTTCCGGCACGCATGGCGAGGTGTCCAAACTGGTCGTAACCGCATCCGGCGGTCCGTTCCGCGGTTGGACGCGCAATCAAATGATCGACATCACGCCCGAGCAGGCATTGAACCATCCGACTTGGCATATGGGGCCGGTCGTAACCATCAACTCGTCCACGTTGATGAACAAGGGCTTGGAAGTGATTGAGGCGAGCCGATTGTTCGACGTGCCGCCAAGCCGCATCGAGGTGACCGTGCACCCGCAGTCCATCGTGCATTCGATGGTCGAGTTCCGTGATGGCGCCACCATTGCGCAGGCTTCGCCACCAGACATGAGGCTGCCGATCGCGTTGGGACTCTCCGCTCCGGAACGACTTGGCGATGTCGCTGCGGCCTGTGATTGGACGAAGGCTGCCACATGGACCTTCGAACCGCTTGATGATGAGGCGTTCCCGGCCGTAAACCTTGCACGCCACTGCCTTGAGGCGTCCGAAAAGCATACCGCGGTACTGAACGCGGCCAACGAACAGGCTGTGCATGCCTTCCTGGAGCATCGTCTACCGTACCTTGGCATCGTCGATACCGTCAAAGAGGTGCTTGACGACATGGACCGTGAAATGCGAGGCAATCCGCTGTTCGCATCCGTGGAGGAAATGAGCCAACTCGAACATGAAGCTCGCCGTCGTGCCGACGAACTGATAAATAAGTAG
PROTEIN sequence
Length: 393
MQTSTVVILGSTGSIGTQGLDVISRHPDRFDVVGLAAGGAHVDLLARQAAQFHVSSVAVFDEHAVQPLRDALAQAGAAHVEVTAGPEAVVNMAGSGADVVLNGITGSIGLEPSIAALRSGSQLALANKESVVAGGHLLFDAQVRAQQINPVDSEHSAIWQSLRSGTHGEVSKLVVTASGGPFRGWTRNQMIDITPEQALNHPTWHMGPVVTINSSTLMNKGLEVIEASRLFDVPPSRIEVTVHPQSIVHSMVEFRDGATIAQASPPDMRLPIALGLSAPERLGDVAAACDWTKAATWTFEPLDDEAFPAVNLARHCLEASEKHTAVLNAANEQAVHAFLEHRLPYLGIVDTVKEVLDDMDREMRGNPLFASVEEMSQLEHEARRRADELINK*