ggKbase home page

NECEvent2014_3_5_scaffold_559_8

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 10409..11137

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=4 Tax=Bifidobacterium dentium RepID=D2Q5J1_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 490
  • Evalue 1.30e-135
  • rbh
recO; DNA repair protein RecO similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 490
  • Evalue 3.60e-136
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1161409 species="Bacteria; Actinobacteria; Bi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 490
  • Evalue 1.80e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGCCGTTGTATCAGGACGAAGGAGTCGTGCTGCGCACGGCAAAACTCGGTGAAGCCGATCGCATCATCACCTTGTTGACGCGCGACCACGGCAAGATCCGTGCCGTTGCCAAAGGCGTGCGCCGTACCAAATCACGGTTCGGCGGGCGTCTGGAACCGTTCATGCGTGTGGATGTGCTGGTAGCCGAAGGCCGCTCCCTTGATGTGATCTCACAGGCCGAATCGATTTCCGCCTATGCCGGACCGATCTGCGCCGACTATGGCGCCTATGCCGCAGCCAATGTGATTGCCGAAACCGCCGACAAACTCGTGGCCGGCGAACACGAGCGTATGACGATGCAGTACCGGCTGGTGTTGGGTGCGTTGAATGCGCTTGCCAAACATGCGCATGATTCGAATGCGATCGGAGACTCCTATGTGATGCGGGCATTGGCACTTGCAGGATGGACTCCGCGCTTGCGTGCCTGCGTGGTCTGCGGAGATCCGATCGATGCCGGAAGGACCTGGTATTTTTCGATTCCAGCCGGTGGCGTGATGTGCTCCGCCGACCACACTCCGGAATCCACGCTGATTCCTTGGAACACACTCTGCCAGATGCAGGCGCTGGTCGACGGCGATTGGGGAGAGTTGGATACGGCACCACTGACCGCCGAAACCCGCCAATTGGTGGAAAAATGGGGCGAGTACTATCTGGAGCGGCCGATTCGTTCGCTGCGCTTGCTAGATTAG
PROTEIN sequence
Length: 243
MPLYQDEGVVLRTAKLGEADRIITLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVDVLVAEGRSLDVISQAESISAYAGPICADYGAYAAANVIAETADKLVAGEHERMTMQYRLVLGALNALAKHAHDSNAIGDSYVMRALALAGWTPRLRACVVCGDPIDAGRTWYFSIPAGGVMCSADHTPESTLIPWNTLCQMQALVDGDWGELDTAPLTAETRQLVEKWGEYYLERPIRSLRLLD*