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NECEvent2014_3_5_scaffold_1013_2

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 1402..2133

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 243.0
  • Bit_score: 493
  • Evalue 1.60e-136
N-formylmethionyl-tRNA deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 450
  • Evalue 4.20e-124
Peptide deformylase n=2 Tax=Bifidobacterium dentium RepID=E0Q4X4_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 243.0
  • Bit_score: 493
  • Evalue 1.20e-136
  • rbh

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCTGCGGCATGGCATCATGGCACAGGGAGATGGGGGGGGGAAGCGTGCCGGGAACAAGAACAACGGAGAAAACATGTTTGGACGTAATGCAAAAGTGAATCTCGAGCTCAACCGCGAGGTCGAGAAACTCATCAAATCCGGCGGCAAGGACAAACTGTTGCCGATCGTGCAGGCCGGCGAACCGGTGCTGCGCCAGCAGACCGCAGCCTATGAGGGGCAGCTGAGCCGCAAGACGCTCGACAAGCTTATCGACACCATGCACGTCACCATGCTTGAAGCCCCGGGCGTCGGATTGGCCGCCACGCAAATTGGCCTAGGCCTGGCCCTGGCCGTGGTGGAGGATCATGTACGTGATGGCGATGACGGCGATCCGCGCGAGGCGGCGGAATTCCCGTTCCACGTGATCATCAATCCCAGCTATGAGCCTATTGGTACGCAAACCCGCAGCTTCTATGAGGGCTGCCTGAGCTTCGACGGGTATCAGGCTGTGCGTAAGCGCTGGCTTGACATCACCGCACGGTGGCAGGATGAGGATGGCAACAGGCACGAGGAGCATCTGCATGGTTGGCCGGCACGCATCTTCCAGCATGAGACCGATCATCTCAGCGGCGAGCTGTACATCGACAAGGCGGAGATTCGGAGCCTGACCACCAATGAGAATCTTGAGGATTTCTGGTGTGAGGATCCGGTGCCGACCGAAGCCGCCGCCGAACTCGGCTTCGATCTTTAA
PROTEIN sequence
Length: 244
MLRHGIMAQGDGGGKRAGNKNNGENMFGRNAKVNLELNREVEKLIKSGGKDKLLPIVQAGEPVLRQQTAAYEGQLSRKTLDKLIDTMHVTMLEAPGVGLAATQIGLGLALAVVEDHVRDGDDGDPREAAEFPFHVIINPSYEPIGTQTRSFYEGCLSFDGYQAVRKRWLDITARWQDEDGNRHEEHLHGWPARIFQHETDHLSGELYIDKAEIRSLTTNENLEDFWCEDPVPTEAAAELGFDL*