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NECEvent2014_3_5_scaffold_1077_2

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(472..1188)

Top 3 Functional Annotations

Value Algorithm Source
LytTr DNA-binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I2_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 238.0
  • Bit_score: 472
  • Evalue 2.10e-130
  • rbh
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ETO97577.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. M similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 238.0
  • Bit_score: 472
  • Evalue 3.80e-130
virR; two-component response regulator VirR similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 238.0
  • Bit_score: 471
  • Evalue 1.70e-130
  • rbh

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCGCAACATACGAATCGGAGTAGTCGAAGACGACCCCGCAAGCTGCCAGCGCGTACTCGACTATCTCAATCGCTATCAAAGCGAGAATGATGAACGATTCACCGTCTCCGTATTCGACGACGGCGCTCGAATCGTCGAGAAGTACACCCCTGTCTATGACATCCTGCTCCTCGACATCGAGATGAAGGAGATGGACGGCATGGAGGCGGCCCGACGCATACGCGAGCGCGACGACCATGTGGTAATCGTGTTCATCACTGCGGCTCCGCAGTATGCCATCAGCGGCTATGAGGTACGTGCGCTGTCATATCTGCTCAAACCCGTACCGTGGTTTGCGTTTTCGCAGGAACTCAAGCGTTCCATCGATGCTCTGCGCCGCAATGGCGACGATTCGATGCTGATCGAGACCGGCAACGGCCAGATGCGTCTTGAATTGACGGACATCGTATACCTCGAATCGATTCGCCACACGATCGTGATCCACACGCTTGATGGCAAATTGTCGATCAATGGCACGCTCAAAGATATGGAGGCGAAGCTCGCCGACCACCATTTCTTCCGCTCGAATTCCTGCTATCTGGTGAATCTTCGGCACGTCGCCGGCGTGGCCGACCAAGATTGCGTGATGTCGAACGGCGAGCGCCTGCGCGTAAGTCGACCGCGTAAAAAGGCGTTCCTGGCGGCATTGGCCGACTTCATGGGAGGCGGAAGGTGA
PROTEIN sequence
Length: 239
MRNIRIGVVEDDPASCQRVLDYLNRYQSENDERFTVSVFDDGARIVEKYTPVYDILLLDIEMKEMDGMEAARRIRERDDHVVIVFITAAPQYAISGYEVRALSYLLKPVPWFAFSQELKRSIDALRRNGDDSMLIETGNGQMRLELTDIVYLESIRHTIVIHTLDGKLSINGTLKDMEAKLADHHFFRSNSCYLVNLRHVAGVADQDCVMSNGERLRVSRPRKKAFLAALADFMGGGR*