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NECEvent2014_3_5_scaffold_1150_3

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(2222..2875)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q837_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 442
  • Evalue 2.10e-121
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 442
  • Evalue 5.90e-122
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB08973.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 442
  • Evalue 3.00e-121

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCCGCGTCCACGTCGAGATTCCGAAATACTGCCGGCCAAGGAACGTCTCGAAAACGCGTTTTGGGAACTGTTGGCCGAACGCAACTATCATAAGATCACCGTCACCGACATCGTGCGCGTTGCGGACGTGAATCGCAATTCCTTCTACTATCATTTCTCCGGACTGCCGGAACTGGCCGATTCCGCCATCCTGCATGCAGTGGAAAACACGCCGATCCCAAGCCGCCCGGGTGCGAACTTCAATCCTGACGATGAATGGCGCAAGCACATCACCGCATTGCTGCGCGATCCCGACCAACGTCAGCGTCTGGACCGTCTGGCCCTGCTCGCCGGCCCGCACAGTTCGCCGGAACTCATCGAATCGCTACGTGATTTCGGACGCCTGACCATGATCAGCGTGCTCGGACTCGACGCCGAGCATCTGGACCTCAAAACCGATCTGATGCTCGACTTCACCGTGGGTGGCATGCTTGCGGTGCTGCAGCGCTGGCCGAAACTGCATGAGCAACTGCCGATCGACACCGTATTCAACGAGGATCTCGCCGTACTCGCGGCAGGCATGTTCATGTCGATGTCCCGCTCGAACATGCTCGACTATTGGCGCAGGATCTTCAGCAACGGATTCGTGCCCGGTGCGAATCCCCGGCAGTGA
PROTEIN sequence
Length: 218
MPRPRRDSEILPAKERLENAFWELLAERNYHKITVTDIVRVADVNRNSFYYHFSGLPELADSAILHAVENTPIPSRPGANFNPDDEWRKHITALLRDPDQRQRLDRLALLAGPHSSPELIESLRDFGRLTMISVLGLDAEHLDLKTDLMLDFTVGGMLAVLQRWPKLHEQLPIDTVFNEDLAVLAAGMFMSMSRSNMLDYWRRIFSNGFVPGANPRQ*