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NECEvent2014_3_5_scaffold_1355_3

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(3080..3193)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobact similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 72
  • Evalue 1.00e-10
Pseudouridine synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q6B5_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 72
  • Evalue 7.60e-11
RNA pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 72
  • Evalue 2.10e-11

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 114
CGTTTGGTCCGTACGCAGATCGGTCCGATCAAGCTTGGCGATTTGAAGTCCGGTACGTACCGGGTGCTTTCGCAGGTCGAGGTGCGTTCCCTGTCGAAGGCGGTGGGACTGTGA
PROTEIN sequence
Length: 38
RLVRTQIGPIKLGDLKSGTYRVLSQVEVRSLSKAVGL*