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NECEvent2014_3_5_scaffold_875_4

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(1874..3895)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=871562 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 673.0
  • Bit_score: 1307
  • Evalue 0.0
Transcription termination factor Rho n=3 Tax=Bifidobacterium dentium RepID=E0QAL0_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 673.0
  • Bit_score: 1307
  • Evalue 0.0
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 673.0
  • Bit_score: 1301
  • Evalue 0.0

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
ATGAAATTGCCTGAGCTCAAAGAGCTCGCCAAGCAGATGGGACTTCGCGGTACCTCCACCATGCGTAAGCCCGAGCTCCTCGCAACGCTTCAGGCCGCCCGTTCCGGCGGCGAAGCGCCGGCCGGCGTTACCGTACGTACGCCGAAGGGCACTCGAGCGGCAAAGCCCGCAGTCGACGCCGATGCCGCCGTCGATGAGTTGGACGTCAAGCCCGCCGAATCCACGGAACCCGCCGAACAGGCGCACGCAGAGATGCCGGCGGACAAGCCCGCTGGCCGCCGTAAGAAGGCCGTAAAGGCTTCGACTGAACCCGCAGCCGATGAATCTCCGGCGGATTCCGCCGAGGCCAAGGCCGCAGTGGAGGCGCTTGACGCATTGGGCGGAGCCCCGAAACAGCGTCGCGAGCGTCGCAAGCGTCGTGATGCCGAAGGCGGAGCCGACCTGCTTGCCGAACTCGATATCGATGGTGCCCAACCGAAGCAGGAGGATCGTCGTCGCCGTCGCAAGGACGATTTCGACAACGAGCCCCGCCGTCGCCGCCGTACTCCCGTGGAAGAGACGAAGGATGAGGATGTCGTGCGCGATCTCGATGACATCCTCGCCGCTCTGCCCGCGCAGAACGATGCCGAAGACAATCACCACGCCAATGCCGAGGATGGCGAGTACGCCCGTCATGGCCGTGGCCGTAATGAGCGCGATCGCAACAACGATCGCACCGACCGCCGCGGACGCCGCATGCGTGGACGCGACCGCGACTTCGACGACCGTGAGGATCGTCGTGGCCGTGATGGTGGCCGTGATGCCGATCGCAACGAGCGTAACGATCGCAACAACGACCATACCGAGCGTGAGCAGCGTCGCGAGGAGCCGAAGGAAGACCTCGTACCGGTCGCCGGCATCGTCGACGTGCTCGAATCCTACGCATTCGTGCGCACCTCCGGCTACTTGCCGGGACCGAATGACGTATACGTTTCCATGGGTCAGGTCAAGAAGTACGGTCTGCGCAAGGGCGACGCCGTGCACGGCTCCATCCGTACTCCGCGTGAGGGCGACCGTCGCAACCAGCGCCAGAAGTTCGTGCCGCTGCAGTCCATCGACTCCATCAACGGGCTGTCCGTGGAAGAGGCGATGAATCGTCCGCAGTTCAACAAGCTGACCCCGCTGTATCCGCAGGAGCGTTTGAAGCAGGAGACCACGCCGAACAAGCTCACCGGCCGTCTCGTTGACATCGTGGCGCCGATCGGCAAGGGCCAGCGCGGCCTGATCGTCTCTCCGCCGAAGGCCGGCAAGACCATCACCCTGCAGAACATCGCCAACGCGATCGCCACCAACAATCCGGAAGTCCACTTGATGGTCGTGCTCGTGGACGAACGTCCGGAAGAGGTCACCGACATGGAGCGTACCGTGCAGGGCGAGGTCATCTCCTCGACCTTCGACCGCCCGGCCTCCGACCACACCACCGTCGCCGAACTCGCCATCGAACGTGCCAAGCGCCTCGTGGAGCTCGGTCAGGACGTGGTCGTGCTGCTCGATTCCATGACCCGCCTCGCCCGCGCCTACAACATCGCCGCACCGGCTTCCGGCCGCATCCTGTCCGGTGGCGTGGACGCCCAGGCCCTGTACCCGCCGAAGAAGTTCTTCGGTGCCGCCCGCAACATCGAAAACGGTGGCTCCCTGACCATCATCTCCTCCGCACTGGTGGAAACCGGTTCCAAGATGGACGAGGTGATCTTCGAGGAATTCAAGGGCACCGGCAACATGGAGCTGCGTCTGAGCCGCGAGCTTGCCGACAAGCGCCTGTTCCCGGCCATCGACGTGAATGCCTCCGGCACCCGTCGCGAGGAGCTCATCACCGATCCGCAGGAATTGCCGATCATCTACCGTCTGCGCCGTCTGCTCGGCGGTCTCGAGCCGGAGCAGGCCTACCAGACGCTTGTGCCGCGTCTGAAGAAGACCGCGACCAACCGCGACTTCATGGCTTCGCTGATTCAGCAGAGCGGTAACGTGACCAGCGGCAACTGA
PROTEIN sequence
Length: 674
MKLPELKELAKQMGLRGTSTMRKPELLATLQAARSGGEAPAGVTVRTPKGTRAAKPAVDADAAVDELDVKPAESTEPAEQAHAEMPADKPAGRRKKAVKASTEPAADESPADSAEAKAAVEALDALGGAPKQRRERRKRRDAEGGADLLAELDIDGAQPKQEDRRRRRKDDFDNEPRRRRRTPVEETKDEDVVRDLDDILAALPAQNDAEDNHHANAEDGEYARHGRGRNERDRNNDRTDRRGRRMRGRDRDFDDREDRRGRDGGRDADRNERNDRNNDHTEREQRREEPKEDLVPVAGIVDVLESYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGSIRTPREGDRRNQRQKFVPLQSIDSINGLSVEEAMNRPQFNKLTPLYPQERLKQETTPNKLTGRLVDIVAPIGKGQRGLIVSPPKAGKTITLQNIANAIATNNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAIDVNASGTRREELITDPQELPIIYRLRRLLGGLEPEQAYQTLVPRLKKTATNRDFMASLIQQSGNVTSGN*