ggKbase home page

NECEvent2014_3_5_scaffold_881_5

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(4938..5486)

Top 3 Functional Annotations

Value Algorithm Source
lysS; lysyl-tRNA synthetase (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 373
  • Evalue 3.70e-101
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 373
  • Evalue 1.80e-100
Lysine--tRNA ligase n=4 Tax=Bifidobacterium dentium RepID=D2Q8P9_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 373
  • Evalue 1.30e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTACGATTCCCTATCCGAGGCGCTGGGCGAGGAAATCGTGCCGAACGGCGGCCCGGACAATCCGGGAACCTCCGTGGAACATTTGGGCGAGATCGCCGACAGGCTTGGCGTGGAACGCGACGACGTGGAAAACCACGGCAAGCTCGTCGAACACCTGTGGGAGCACTTCTACGAAGACAAGCTGTACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAAACCTCCCCGCTGGTCAAAGGCCACCGCTCCAAGGCAGGCGTAGTCGAGAAGTGGGATCTGTACGTGCGTGGCTTCGAGCTGGCCACCGGCTACTCCGAGCTCAACGATCCGGTCGTGCAGCGCGAACGCTTCGTGGCTCAGGCCAAGGCGGCGCTCGCCGGCGATGAAGAGGCCTGTGACATTGACGAGGACTTCCTCGAGGCCCTTGGCGTCGGCATGCCCCCGGCAGGCGGCATGGGTATGGGCATCGACCGACTGCTCATCGCACTGACCGGTGCCACCATCCGCGAGACCATCACCTTCCCGCTGGTGAAGCCGCTGAATTAA
PROTEIN sequence
Length: 183
MYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADRLGVERDDVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATGYSELNDPVVQRERFVAQAKAALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPLN*