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NECEvent2014_3_5_scaffold_887_1

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(3..539)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-binding ATPase YchF n=2 Tax=Bifidobacterium dentium RepID=E0Q7Q9_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 5.20e-94
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. M similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 7.40e-94
GTP-binding protein, probable translation factor similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 342
  • Evalue 9.00e-92

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCTCTTACTATCGGAATCGTCGGACTGCCGAATGTCGGCAAGTCCACCATGTTCAATGCACTGACCCGCAACAACGTGCTGGCCGAGAACTATCCGTTCGCCACCATCGAGCCGAACACCGGCATCGTGCCGTTGCCGGACGATCGTCTGCCGATCCTGGCCAAGCTCGTGCACACCGAGAAGATCGTGCCGGCCACCGTCACCTTCGTCGATATCGCAGGCATCGTCAAGGGTGCCTCCGAAGGCGAAGGGTTGGGTAACAAGTTCCTTGCCAACATTCGTGAGGCCGATGCGATCTGTGAGGTCGTGCGTGCTTTCGAGGATGATGACATCGTGCACGTCAACGGCAAGGTCGACCCAGCCGATGACATCGACACCATCAACACCGAATTGATCCTCGCCGATTTGCAGACCATCGAAAACGCATTGCCGAAACTCGAGAAGGATCTGCGAGGCAAGAAGATCGACCCGGCCTATATGGCGGCCGTCAAGGAGGCCAAGGCCATTCTCGAATCCGGTGAGACCATCGACAAG
PROTEIN sequence
Length: 179
MSLTIGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPILAKLVHTEKIVPATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDDDIVHVNGKVDPADDIDTINTELILADLQTIENALPKLEKDLRGKKIDPAYMAAVKEAKAILESGETIDK