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NECEvent2014_3_5_scaffold_888_1

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(3..554)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q711_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 184.0
  • Bit_score: 371
  • Evalue 5.00e-100
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFM41526.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 184.0
  • Bit_score: 371
  • Evalue 7.10e-100
rbsR; ribose operon repressor similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 354
  • Evalue 1.80e-95

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCTAGAATCACTGTGTATGATATCGCAAAAAAAGCTGGTGTATCGACCGCGACGGTCTCCTTTGCTTTTAGACATCCGGATAAGGTAAAAGATGATACCAGGGCCAGAATCCTGAGGATTTCTGAGGAGTTTGGTTATGTGCCCAGCGGTAATGCCCAAGGACTCGCTAAGGGTAGCACCGACACTTTGGGCATGTATGCATTCGATATGTTGCTGGAAAGACCTCAGGGAAGCAACCTTGAGGATGATTGGCCTGATGTTTCCCCCAGATCCATCGACGAGCCTCTGGACGGTGACGAACCCAACGTTCTTGTATATCCGTTATACGTTGATGAGGTGCTTCGTGGTTTCGAACTCGAATGCTGGAAGAGTGGCAAGGGAATACTTATGGGAGCCGCCTCGGAAAGGGATGATCACAGATCGGTAACGGATATCGCCGGCCGCGTTGATGGACTGGCGCTGATGCCAAGCGGATATAACGATGCGCTTCCTCTTTCCATGTTGGCGAAGACCATCCCGCTTGTAATGGTGGGTGTGGGCGATGAAAAA
PROTEIN sequence
Length: 184
MARITVYDIAKKAGVSTATVSFAFRHPDKVKDDTRARILRISEEFGYVPSGNAQGLAKGSTDTLGMYAFDMLLERPQGSNLEDDWPDVSPRSIDEPLDGDEPNVLVYPLYVDEVLRGFELECWKSGKGILMGAASERDDHRSVTDIAGRVDGLALMPSGYNDALPLSMLAKTIPLVMVGVGDEK