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NECEvent2014_3_5_scaffold_783_4

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(2747..3418)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW82_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 411
  • Evalue 5.30e-112
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:BAR02577.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum D similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 411
  • Evalue 7.50e-112
LacI-type response repressor similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 218.0
  • Bit_score: 327
  • Evalue 2.90e-87

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Taxonomy

Bifidobacterium catenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGTCAGTCAATATTCAAGACGTTGCCAAAGCGGCAAAGGTGTCGGTTTCCACGGTGTCCAGATCATTCACCCGACCTGAGCTCGTATCTGAGGCGACACGGTCCAGGGTGTTGCGCATCGCCGACGAGATGAGTTTCTCCATCTCCCGTTCGGCCACTGCGCTCAAGTCCGGCAAAGCATTGCGTGTCGCCTTGCTGATGAGCGACCATATCCGACTATGGTTCAGCGCTTCCGTCATCGAAGGGTTGAACCAGGTTTTGCACGCAGACGGCTATGATTTATCGATCTTCCAGATCTCCAGTATCGAGGAACGCCGTGAGTTCTTTGATATGCTGCCGGTTCGTCGCAATGCCGACGCGGTGATCGTTGCTTCCATCGATGTCGATGCGCAGGAAAGCGCACAGCTGGCCAGCACCGGCGTACCAATTATCGGCATCAACTGTGTGAATCCAAGAGAATACGGTTTCACTGCGGCCGTGGGGATAGACGATGATCAAGGTTCGCGTCTGGTTGCGCGCCATCTTATCGGGCTGGGGCATCGCAACATTGTCTACGTACGTACGTCGCGTGAGGTTTCCTTGCACTTCAGTGTGCAGCAACGTTATGACTCCTTCGTCAAGGCCTGTCTGGAACAGGGTGTCACGAACTACGTTGGTTGCGCAGGAAAGTGA
PROTEIN sequence
Length: 224
MSVNIQDVAKAAKVSVSTVSRSFTRPELVSEATRSRVLRIADEMSFSISRSATALKSGKALRVALLMSDHIRLWFSASVIEGLNQVLHADGYDLSIFQISSIEERREFFDMLPVRRNADAVIVASIDVDAQESAQLASTGVPIIGINCVNPREYGFTAAVGIDDDQGSRLVARHLIGLGHRNIVYVRTSREVSLHFSVQQRYDSFVKACLEQGVTNYVGCAGK*