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NECEvent2014_3_5_scaffold_3984_1

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(3..830)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=2 Tax=Bifidobacterium dentium RepID=D2Q591_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 554
  • Evalue 6.30e-155
  • rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 276.0
  • Bit_score: 555
  • Evalue 3.00e-155
integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 554
  • Evalue 1.80e-155

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGATGGTTGCGAACGTCTGGTCAGGCAGTTCCTCGCGCACATTGACGTGGAACGGGGACTGTCCAAGGCCACGGTCTGCGCGTACGGTTCCGACCTGCATAAATACGTGTCCTGGCTGCATGAACAGGGCATCCATGATCTCGATGACGTGACCACACGGCATGTCGAGGAATATGTGGCCTCGCTCGACGATTCGGGGGAGAGCGCCCGCAGCAAGGCTCGTCGACTGGCCAGCATTCATGCCTTTCATCGTTTCGCCCTCAGCGAGCATGTCGTGCACGATGATGTCGCGGCACAGGTCAAGGCGCCCAAGGGTGCAAGCACCCTGCCGGACGTGCTTTCCGTCGATGAGGTGATGCGATTGATGGATTCCATCCCGCTCTCGCGGCATCACGATGGGAAACAAGGGCATGGTGATGCCGCGGCCGATGACCCGGTGATGCTACGTGACAAGGCGTTGCTCGAGTTCATGTATGCCACGGGATCGCGGGTCTCCGAAGCATGCGGCGTCGATCTGGACGACATCGATTTGGACGATAAGGTGGCGCGTCTGATGGGCAAGGGCTCCAAACAGCGTCTGGTACCGGTAGGCAGCTTCGCGTGCGAGGCTTTGCGCCGATATCTCAGATTCGGACGGCCCGCCTTGCAATCCAAGTCCAAAGGAGCAGCCGAGCACAGGGCGGTGTTCCTCAACAAGCGCGGCAAACGACTGTCCAGACAGTCGGTGTGGGAAATCATCCGAACCGCCGGTGAGCGTGCGCACATCACCAAGCCGCTGCATCCGCATACCTTGCGCCATTCCTTCGCGACGCATCTGATTCAGGGC
PROTEIN sequence
Length: 276
MDGCERLVRQFLAHIDVERGLSKATVCAYGSDLHKYVSWLHEQGIHDLDDVTTRHVEEYVASLDDSGESARSKARRLASIHAFHRFALSEHVVHDDVAAQVKAPKGASTLPDVLSVDEVMRLMDSIPLSRHHDGKQGHGDAAADDPVMLRDKALLEFMYATGSRVSEACGVDLDDIDLDDKVARLMGKGSKQRLVPVGSFACEALRRYLRFGRPALQSKSKGAAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHITKPLHPHTLRHSFATHLIQG