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NECEvent2014_3_5_scaffold_462

Alias: 173_003_scaffold_462

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_462_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3..701)
DNA (699bp) protein (233aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=2 Tax=Atopobium RepID=N2BIV1_9ACTN
NECEvent2014_3_5_scaffold_462_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1268..2014
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BNA5_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41696.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
ABC transporter
NECEvent2014_3_5_scaffold_462_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2007..2681
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BT66_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41695.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
binding-protein-dependent transport system inner membrane protein rbh
NECEvent2014_3_5_scaffold_462_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2762..3595
DNA (834bp) protein (278aa)
Lipoprotein n=2 Tax=Atopobium RepID=N2BXN8_9ACTN rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
NLPA lipoprotein
NECEvent2014_3_5_scaffold_462_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3724..5484)
DNA (1761bp) protein (587aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales;
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BT11_9ACTN rbh
NECEvent2014_3_5_scaffold_462_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5688..6449)
DNA (762bp) protein (254aa)
LPXTG-domain-containing protein cell wall anchor domain n=2 Tax=Atopobium RepID=N2BIU8_9ACTN rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EMZ41692.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" sour
hypothetical protein
NECEvent2014_3_5_scaffold_462_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6561..8873)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BNA1_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41691.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
fimbrial isopeptide formation D2 domain protein
NECEvent2014_3_5_scaffold_462_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9103..10383)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BT62_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41690.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_5_scaffold_462_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10727..12340)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=U2U7P2_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41689.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_5_scaffold_462_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12762..13193)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BT07_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41688.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_5_scaffold_462_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13278..14696)
DNA (1419bp) protein (473aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC protein n=2 Tax=Atopobium RepID=N2BIU2_9ACTN rbh
FolC protein {ECO:0000313|EMBL:EMZ41687.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
NECEvent2014_3_5_scaffold_462_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14699..15271)
DNA (573bp) protein (191aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=2 Tax=Atopobium RepID=N2BN95_9ACTN rbh
NECEvent2014_3_5_scaffold_462_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15281..16141)
DNA (861bp) protein (287aa)
Bifunctional protein FolD n=2 Tax=Atopobium RepID=N2BT57_9ACTN rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+)
NECEvent2014_3_5_scaffold_462_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16148..16495)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BXM9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41684.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
methenyltetrahydrofolate cyclohydrolase
Displaying 14 items

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