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NECEvent2014_3_5_scaffold_195_6

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(6839..7042)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspLA n=2 Tax=Atopobium RepID=N2BPR0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 142
  • Evalue 1.80e-31
Cold shock-like protein CspLA {ECO:0000313|EMBL:EMZ42276.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 142
  • Evalue 2.50e-31
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 7.40e-31

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCTCAGGGTACTGTTAAGTGGTTCAATCCAGACAAGGGTTACGGATTCATCTCTCGCGAAGACGGCGACGATTTGTTCGTACACTTCTCCGAGATTCAGATGGACGGTTTTAAGACTCTTGATGAGGGCCAGGCTGTCGAGTTTGACATCACCACTGGTCAGAATGGTAAGCAGCAGGCTTCCAACGTTCGCAAGGCATAG
PROTEIN sequence
Length: 68
MAQGTVKWFNPDKGYGFISREDGDDLFVHFSEIQMDGFKTLDEGQAVEFDITTGQNGKQQASNVRKA*