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NECEvent2014_3_5_scaffold_661_4

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(2852..3400)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=997872 species="Bacteria; Actinobacteria; Corioba similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 182.0
  • Bit_score: 368
  • Evalue 5.90e-99
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 175.0
  • Bit_score: 223
  • Evalue 6.20e-56
Shikimate kinase n=2 Tax=Atopobium RepID=N2BIX7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 369
  • Evalue 1.50e-99
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGCAAAGGCCGGAGCGTGGATATATTGTACACAAGGGCTGTGACCACGTCTTTTTTGTGGGCTTCTTTGGTGCTGGCAAGTCTACCTTGGCACGCAATATTGGCCATATGTTCAGTCGCTCATTCACGGATACGGATCGCATTATAGAGCGCATGTATCACTGCTCACTGGCGCAAATGTATGCAGATGGCGGGGAGAAGGCCCTGCGTCAGGCAGAAACCAGCGCCCTCCAGAGTTTGCAGTCACAAAAAAGTCTGCTTGTAAGCTGTGGAGGCGGTATCGTAGAAAGTGAGCTCAATTGCCAGCTCATGCATGAGATGGGTATCGTTGTGTATCTAGATGGCACCTTATCGGATTCCCTCAAACAGATTCAACGCACTGATCGCAGGCCTGATTTGACACTGTGTTCGAGTCCTGAGGAATTGTTTGAACGGCGTCGTCCTCTCTATCAAAATGCAGCTGACTATTCGATTTGTATTACGGACAAGACATTTGATGAGGTTGCGCAAATAACCGCACAACTCTTGTGGGAGAAAGGCCTGCTATGA
PROTEIN sequence
Length: 183
VQRPERGYIVHKGCDHVFFVGFFGAGKSTLARNIGHMFSRSFTDTDRIIERMYHCSLAQMYADGGEKALRQAETSALQSLQSQKSLLVSCGGGIVESELNCQLMHEMGIVVYLDGTLSDSLKQIQRTDRRPDLTLCSSPEELFERRRPLYQNAADYSICITDKTFDEVAQITAQLLWEKGLL*