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NECEvent2014_3_5_scaffold_1040_3

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 783..2153

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; ( similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 456.0
  • Bit_score: 910
  • Evalue 8.00e-262
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Atopobium RepID=N2BNS1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 456.0
  • Bit_score: 910
  • Evalue 5.70e-262
  • rbh
MiaB family RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 451.0
  • Bit_score: 649
  • Evalue 6.70e-184

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGCTGATTTTCCTGTTCTTGTGGGCAAAACCTACTCTATTAAGACCTTTGGCTGCCAGATGAACCTGCATGACTCAGAGCGCGTCTCTGGTCTTTTGGATTCTATTGGCATGAATGAAGCACCTTCAATGGAGGAAGCCGATACAAACGTCTTTATGACCTGTTGTGTGCGTGAGAAGGCCGATACGCGCCTGTATGGTCAGGTTTCTTCCTTGGTAAGTGCCCCGGTTCCTGCGGCTGGCAAGCGCGTTGTTGCGGTTGGTGGATGCATTGCCCAGCGTGACGGTGAGAATCTGCGCAACAACATTCCCAATGTAGACGTCGTTTTTGGCACCCAGGCCATTCAGAATTTACCTCACTTGCTTGTTGAGGCGTTCAACTCCCAAAGCAACAGCACGATCTATGCCGATACAGAAGAGTCCTACAAGAATTTCTCGACAGAGCTTCCCAGTAATCGCGCGCAGTCATTCCACGCCTGGCTGCCCATTATGACGGGCTGTAATAATTTCTGCAGTTATTGTATTGTCCCGTACGTACGTGGCCGAGAAAACAGTCGTGACATGGAGGACATTGTTATAGAAGCAGAGCACCTCGTGCACGATGGCGTTCGCGAGATTACCCTGCTTGGTCAAAACGTCAACTCATATGGGCGCAATCGTTATGGCAAGCCTCGCTTTGCGGAGCTGCTGCGCCGTGTGGGCAATACAGGCATTGAGCGCCTGCGCTTTACCTCCTCGCACCCCAAGGATTTGTCCAGCGATACCATTGCTGCTATGGCAGAAACTCCAGCGGTTATGCCGCATCTTCATCTGGCGGTACAAAGTGGCTCTACCAAGGTACTGCGTAAGATGAATCGCCATTATACTCGTGAAGACTTTTTGCACTTAGTGGACAACCTTCGTGCCACCATGCCCGATATTGCGCTTTCCACAGACATTATCGTTGGTTTTCCCGGCGAGACCGAAGAGGACTTTGAGCAAACACTTTCTTTGGTAAAAGAGATTGGATTTTCTTCGGCGTTTACCTTCATTTATTCTAAGCGTCCAGGTACTCCTGCCGAGAAAATCGTTGATTCTACTCCTCATGAGGTAATTCAGGAACGTTTTGAGCGCCTTGCCCAGTTGGTGAGCACGCTTTCATATGCGTCTAACCAAGCTGACCTTCATACGGTCTCTGAAGTGCTTGTGGAGGGTCGTTCTAAGTCTGATGAGAACGTTATGGTGGGCCACAGCCGCAAAAATCAAACCGTACACTTCTCGGTGCCCAATACCATGCAAGCCCAGGATCTTATCGGCAAGATTGTAGATGTGCGTGTGGATGAGGCGCGTACTTGGTATCTGCGCGGGCCTCTGATTGGTGCCGTGCGATGA
PROTEIN sequence
Length: 457
MADFPVLVGKTYSIKTFGCQMNLHDSERVSGLLDSIGMNEAPSMEEADTNVFMTCCVREKADTRLYGQVSSLVSAPVPAAGKRVVAVGGCIAQRDGENLRNNIPNVDVVFGTQAIQNLPHLLVEAFNSQSNSTIYADTEESYKNFSTELPSNRAQSFHAWLPIMTGCNNFCSYCIVPYVRGRENSRDMEDIVIEAEHLVHDGVREITLLGQNVNSYGRNRYGKPRFAELLRRVGNTGIERLRFTSSHPKDLSSDTIAAMAETPAVMPHLHLAVQSGSTKVLRKMNRHYTREDFLHLVDNLRATMPDIALSTDIIVGFPGETEEDFEQTLSLVKEIGFSSAFTFIYSKRPGTPAEKIVDSTPHEVIQERFERLAQLVSTLSYASNQADLHTVSEVLVEGRSKSDENVMVGHSRKNQTVHFSVPNTMQAQDLIGKIVDVRVDEARTWYLRGPLIGAVR*