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NECEvent2014_3_5_scaffold_3140_1

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(1..1197)

Top 3 Functional Annotations

Value Algorithm Source
ChvD family ATP-binding cassette protein n=2 Tax=Atopobium RepID=N2BWD3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 794
  • Evalue 5.20e-227
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EMZ42880.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium m similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 794
  • Evalue 7.30e-227
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 400.0
  • Bit_score: 682
  • Evalue 8.20e-194

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGCAGAGTTTATTTATCAGATGTATAAGGTTCGCAAGGCCTATGATGGCAAAACCATTCTGGATGATGTAACCATGGGTTTTTACCCCGGAGCCAAGATTGGTGTTGTGGGGCCAAATGGCATGGGAAAATCTACCCTGCTTAAAATCATGGCAGGAACCGAGGACGTTTCTAACGGAGAAGCCCGTCTTGCTGCGGGCTATACCGTGGGCTTGCTGCAGCAAGAGCCACCGCTGGATGAAAGTAAAACGGTTAAAGAAAATATCGAGCTTGCGTTTGCAGACCTGCTTGCAAAGATTGACCGCTTTAATGAGATTGGCAACCTCATGGCCGATCCCGATGCAGACTTTGATGCCCTCATGGCAGAGATGGGCAAGCTGCAGGATGAGATCGATGCCGCCAATGGTTGGGATTTGGACAGCCAGCTTTCTCAGGCTATGGATGCGCTGCAGTGTCCCGACGCGGATGAAAATGTGGCTCACCTCTCCGGTGGTGAGCGTCGTCGTGTGGCGCTGTGCAAGCTTTTGCTTGAGGCACCTGATCTGCTGCTACTTGACGAGCCAACTAACCATTTGGATGCCGAATCCGTTCTATGGCTTGAGCAGTTCCTCAAAAATTATCCCGGTGCCGTTTTGGCGGTAACCCACGATCGTTACTTCTTGGACAATGTGGCCCAATGGATCTGCGAGGTTGATCGCGGAACGCTGTACCCCTATGAGGGTAACTACTCCACCTATCTGGAGACTAAGGCTCAGCGTCTGGAGATGGAGTCCCGCCAAAATGAGAAACGCGCCCGTAAGATGAAGTCCGAGCTTGAGTGGGTTCGTTCTTCTCAGAAGGCTCGTCAGGCCAAAAGCAAGGCTCGCCTGGCTGCATATGAGCAAATGGAGGCAGAGGCTCGTCGCACCACCAAGGTAGATTTTACAGACATTCACATCCCTGTGGGTCCTCGTCTGGGCACCAAGGTTTTGGAAGTTGAGCACCTGCACAAGTCCTTTGGTGACCGCGTGCTCATAGAGGACCTAAGCTTTACCTTGCCACGCAACGGCATTGTTGGCGTGATTGGCCCCAACGGCGTGGGCAAGTCTACGCTCTTCAAAATGATTACCGGCTCCGAGCAGCCCACTTCTGGTGCACTTACCGTTGGTGAGACTGTTGCGCTTTCCTACGTTGATCAGGGTCGAACCGGTCTTGAT
PROTEIN sequence
Length: 399
MAEFIYQMYKVRKAYDGKTILDDVTMGFYPGAKIGVVGPNGMGKSTLLKIMAGTEDVSNGEARLAAGYTVGLLQQEPPLDESKTVKENIELAFADLLAKIDRFNEIGNLMADPDADFDALMAEMGKLQDEIDAANGWDLDSQLSQAMDALQCPDADENVAHLSGGERRRVALCKLLLEAPDLLLLDEPTNHLDAESVLWLEQFLKNYPGAVLAVTHDRYFLDNVAQWICEVDRGTLYPYEGNYSTYLETKAQRLEMESRQNEKRARKMKSELEWVRSSQKARQAKSKARLAAYEQMEAEARRTTKVDFTDIHIPVGPRLGTKVLEVEHLHKSFGDRVLIEDLSFTLPRNGIVGVIGPNGVGKSTLFKMITGSEQPTSGALTVGETVALSYVDQGRTGLD