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NECEvent2014_3_5_scaffold_1416_4

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2315..2839)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZVC4_CLOB0 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 174.0
  • Bit_score: 312
  • Evalue 2.60e-82
  • rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24948.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 174.0
  • Bit_score: 346
  • Evalue 3.00e-92
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 174.0
  • Bit_score: 311
  • Evalue 2.20e-82
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 525
GTGGAAGATTCTAAATTGATAGTAGAAATTAAAAAGGGAAAGATTCATTTAGTTGATGAATTAATAAAAAAATATTATGGGAAAGTATACTACTATTGTTACCGACATTTAAACAATAAGGAGGCTGCCCAGGATTTAACTCAAGAAGTATTCATGAAAGTAATAAAAACTATTGGAAGTTATAAACATTATGGAAAATTTGAAAATTACCTTTACGTAGTTGCAGGAAATACATGCAAAGATTTTTATAAGAAAGAATCCAAATATGTTTTAAAAGAAGCAGAAATAAAGCCAGATTCTTATAAAGAAGAGGAGATTTCTAAATTAGAAAATAAAGTGATGATTGAAGAGGCCTTAAACAAGCTTTCAAAAGATCAACGTGAAATAATAATTTTAAGGTTCTATCAAGATCTAAAAATAAAAGATATTGCTAAGATTATGAATTCAGGTATTTCTATAACTAAATATAGGTTGAAAAAGGCAATAAAATTAATTAGTGAGAGTATGAAAGGAGGACAAGCATGA
PROTEIN sequence
Length: 175
VEDSKLIVEIKKGKIHLVDELIKKYYGKVYYYCYRHLNNKEAAQDLTQEVFMKVIKTIGSYKHYGKFENYLYVVAGNTCKDFYKKESKYVLKEAEIKPDSYKEEEISKLENKVMIEEALNKLSKDQREIIILRFYQDLKIKDIAKIMNSGISITKYRLKKAIKLISESMKGGQA*