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NECEvent2014_3_5_scaffold_1001_7

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 4278..4688

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 137.0
  • Bit_score: 272
  • Evalue 4.40e-70
truB; tRNA pseudouridine synthase B (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 137.0
  • Bit_score: 265
  • Evalue 8.20e-69
tRNA pseudouridine synthase B n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUB7_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 137.0
  • Bit_score: 272
  • Evalue 3.10e-70

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 411
ATGGATGGAGTAATAAATGTTTTAAAACCAAAGGGAATAACATCCTTTGATGTAGTTAGAGATATAAGAAAAATAGCAAAAATAAAAAAAGTTGGTCACACAGGTACATTAGATCCCTTAGCTTCTGGAGTTCTTCCAGTGTGTATAGGTAAAGCTACAAAAATAGTAGACTATATAATGGAGGGAACCAAAACCTATAGAGTAGAAATGAAACTTGGAACTACTACGGATACCTATGATAGAGAAGGTACTGTGTTAGAGGAAAAAGAAGTTAGTGTATCTCCTACAGAAGTAGAAAAGGCTATAGAAAAATATAAAGGTGATATAAAGCAAGTGCCACCTATGTATTCTGCCTTAAAAGTTAATGGACGAAAACTTTATGATTTAGCTAGAAAAGGTATAGAGGTAGAA
PROTEIN sequence
Length: 137
MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIMEGTKTYRVEMKLGTTTDTYDREGTVLEEKEVSVSPTEVEKAIEKYKGDIKQVPPMYSALKVNGRKLYDLARKGIEVE