ggKbase home page

NECEvent2014_3_5_scaffold_2040_2

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(1088..2101)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002E8D0E2 similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 337.0
  • Bit_score: 321
  • Evalue 1.10e-84
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEG93614.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 334.0
  • Bit_score: 308
  • Evalue 1.30e-80
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 335.0
  • Bit_score: 245
  • Evalue 1.70e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia inulinivorans → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1014
ACTATGTTTGGATTCTTGCCAACAAATGTAGCGTATATTAGTATAACAGCAACTATTTGTACTATTTTCTTATTTATATATAATATTAAATTAACCCAAAAACTAATTCCTAATATACAAATTACAATTAAAAAATTTTCTTTTAGTAAAGTTAAAGAATTGATTGGGGCAGGAGTATGGAGTTCAGTTACTAAATTATCACAAGTATTATCTGATGGAATGGATTTATTAATAGCTAATATTGGAATAAGTTCATATGCTATGGGACAGTTATCTATTGCGTATACTATTCCTACTATATTAGCTTCAGTATTAGGCACAATTTCGTCATTATTTAATCCACAACAGACATATTATTATGCCCAAAATGATATTAAATCTGTTGTTAGAGAAATAAAAATAAATATGAAATTAACAGGTTTTTTTACAAGTATAATATTTTCTGGAATAGTAACATATGGATATGAGTTTTTTAAGTTATGGGTACCAACTCAAAATATAGATATGATATATTCACTTGCAATATTATCAATAATTTCTGTATTAGCTTCGGGTATAGCTAATCCATTAATAAGTGTTTTTTTACTAACTAACCATTTAAAAGTAAATTCTTTAGTATGGCTTGGCGTAAGTATATTTGATACAATAGTTGTGCTTATTTTGGTGAAGTACACGAATTTTGGTGTTTTTGCGGTAGCTGGGGTAAGTAAAATAGTAAGTGTAATAATATATTTAACATATGTACCGATATATTCAAGTAAGTGTCTAAATATTTCTAAAAAGACTTTTTATCCAATGATATTTAGATATATAGTTAATACATTTGTAATACTAATTATTTTTATGACTTTAAAGACAATGCTACCAGGTGTCAATAACTTCATATATTTTATATTTAACTGTAGTGTATTATCAATTATTGGATGTATATTTAATTTTGTTGCATTTTTAGATAAATATGAACAAGAATACTTATTATCAATTGTATGCAAAAGATTAGTTAAACATAGATAA
PROTEIN sequence
Length: 338
TMFGFLPTNVAYISITATICTIFLFIYNIKLTQKLIPNIQITIKKFSFSKVKELIGAGVWSSVTKLSQVLSDGMDLLIANIGISSYAMGQLSIAYTIPTILASVLGTISSLFNPQQTYYYAQNDIKSVVREIKINMKLTGFFTSIIFSGIVTYGYEFFKLWVPTQNIDMIYSLAILSIISVLASGIANPLISVFLLTNHLKVNSLVWLGVSIFDTIVVLILVKYTNFGVFAVAGVSKIVSVIIYLTYVPIYSSKCLNISKKTFYPMIFRYIVNTFVILIIFMTLKTMLPGVNNFIYFIFNCSVLSIIGCIFNFVAFLDKYEQEYLLSIVCKRLVKHR*