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NECEvent2014_3_5_scaffold_3438_2

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(366..1250)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T5W6_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 591
  • Evalue 6.50e-166
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDU37138.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 294.0
  • Bit_score: 592
  • Evalue 4.10e-166
acoR; aco operon transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 294.0
  • Bit_score: 581
  • Evalue 1.40e-163

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
GTGTTAATTACTGGAGAGAGTGGAACTGGTAAAGAATTGTTTGCTCATTCAATTCATAACTCTAGTAATCGATGTAAAGGTCCCTTTATAGCAATAAACTGTGCGGCTCTTCCAAAGGACTTAGTTGAAAGCGAACTTTTTGGATATGAAAAATCTGCTTTTACAGGAGCATCAAAGGAGGGAAATCCTGGAAAGTTTGAATTGGCAAATAGAGGTACAATTTTTCTAGATGAGATTGGGGAATTGCCCTTAGAAATTCAATCTAAGCTTTTAAGAGTTTTAGATAACCATACAATAACAAGAATAGGTGGAAATTTTGAAAGAAAATTAGATGTAAGGGTTATAGCTGCAACAAATAGAAATTTAAATGAAGAAATTAATAAAAATAATTTTAGAAGTGATTTATATTATAGATTAAATGTATTTAATGTAAGATTAATTCCCTTAAGGGAAAGACCGGAAGACATTGAATTATGTGCAGACTATTTTCTTCAAAGATTAAATGATAAAAACCAGAGAATGAATAAATCCTTTGACAAAGAGTTTATAAATTTAATTAAAGACTACAATTGGCCAGGAAATGTGAGAGAGCTTGAAAATGTAATTCAAAGAGCTTATTATTTATCCAAGGATGAAGTTATTAATTATTCCTTTATTCCAGAATATATAAATGGCAATATAAAAGGGGAAGAAATTAAAGATAAGGAAGAAAAATCTAAACCACCAACCCTTGAAGAAATGGAAAGAAAGCTTATTATACAAGCTTTAAAGTATTGTAATGGAAACGTTATTAATGCCAGCAAGATTATAGGAGTTGGTAAATCAACTTTATATAGAAAAATAGAAAAGTATAGATTAGAGGAAGTTTCAAAATGGGAAAAATAA
PROTEIN sequence
Length: 295
VLITGESGTGKELFAHSIHNSSNRCKGPFIAINCAALPKDLVESELFGYEKSAFTGASKEGNPGKFELANRGTIFLDEIGELPLEIQSKLLRVLDNHTITRIGGNFERKLDVRVIAATNRNLNEEINKNNFRSDLYYRLNVFNVRLIPLRERPEDIELCADYFLQRLNDKNQRMNKSFDKEFINLIKDYNWPGNVRELENVIQRAYYLSKDEVINYSFIPEYINGNIKGEEIKDKEEKSKPPTLEEMERKLIIQALKYCNGNVINASKIIGVGKSTLYRKIEKYRLEEVSKWEK*