ggKbase home page

NECEvent2014_3_5_scaffold_2384_1

Organism: NECEvent2014_3_5_Haemophilus_parainfluenzae_40_5_v_partial

partial RP 8 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: 1..486

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=888828 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 161.0
  • Bit_score: 312
  • Evalue 4.50e-82
Transcription termination factor Rho n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W1S3_HAEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 161.0
  • Bit_score: 312
  • Evalue 3.20e-82
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 161.0
  • Bit_score: 312
  • Evalue 9.00e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GACGTTATCATCCTGCTCGACTCCATTACCCGTCTGGCGCGTGCCTACAACACCGTGGTCCCGGCGTCTGGTAAAGTCCTGACCGGTGGTGTGGATGCTAACGCCCTGCATCGTCCAAAACGTTTCTTTGGTGCTGCACGTAACGTAGAAGAAGGTGGTAGTTTAACCATTATTGCTACTGCACTTGTAGATACCGGGTCAAAAATGGATGAGGTTATCTTTGAAGAATTTAAAGGTACCGGTAATATGGAATTACATCTTTCTCGCAAAATCGCTGAAAAACGTGTGTTCCCAGCAATCGACTTCAACCGTTCAGGTACGCGTAAAGAAGACTTACTTACCACACCAGATGAATTACAAAAAATGTGGATTCTTCGCAAAATCCTTAACCCAATGGGTGAAGTGGAAGCGATGGAATTCCTTATCGACAAACTTATGGTGGCGAAAACCAACGATGAGTTTTTTGAAATTATGAAGCGGTCTTAA
PROTEIN sequence
Length: 162
DVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAIDFNRSGTRKEDLLTTPDELQKMWILRKILNPMGEVEAMEFLIDKLMVAKTNDEFFEIMKRS*