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NECEvent2014_3_5_scaffold_4233_2

Organism: NECEvent2014_3_5_Haemophilus_parainfluenzae_40_5_v_partial

partial RP 8 / 55 BSCG 6 / 51 ASCG 1 / 38
Location: comp(891..1034)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=3 Tax=Haemophilus parainfluenzae RepID=E1W486_HAEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 1.60e-18
HF-I, host factor for RNA phage Q beta replication similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 4.60e-19
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 2.30e-18

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Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
AACACGGTTAATCAAATGGTGTACAAACACGCAATTTCGACTGTGGTTCCAGCACGTTCTGTTTCTCACCACAATAATAATGGCGGTCATCATGCAGCACAAACTTCTGATGCTGTAGCGGAAGTAGAAACACAAGCAGAATAA
PROTEIN sequence
Length: 48
NTVNQMVYKHAISTVVPARSVSHHNNNGGHHAAQTSDAVAEVETQAE*