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NECEvent2014_3_5_scaffold_652_1

Organism: NECEvent2014_3_5__Bifidobacteriales_plasmid_like_52_9

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2..457)

Top 3 Functional Annotations

Value Algorithm Source
TraG family protein n=2 Tax=Parascardovia denticolens RepID=E6JZP2_PARDN similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 146.0
  • Bit_score: 284
  • Evalue 6.70e-74
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:ETO96934.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifi similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 152.0
  • Bit_score: 298
  • Evalue 6.30e-78
TRAG family protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 141.0
  • Bit_score: 109
  • Evalue 6.40e-22

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGACATCGAATAGGAAAATGAGCCCCATCACATGGCTCATCCTTACTCTCATGGGCTTTTATGCGGGCAATATCGTCAGCAGGCCAGTACGCGTATCCTACATGGCGTCCCACGATGTTCCAGCCGCGATAAATGCAAGCTTGGATGCGTATAAAAACCCGGTCCCCAGTATGAACCGCATGGACCTCATCGCAGGCGCCGCCATAGCAGCCATTGTGCTCCTGGCTTTGCTCTACCAATACAGCGGGCAACACGTCACAAGAGACGGTGAGGAACACGGCAGCGCCGCTTGGGCAAGCAGCACGGACATGCGACCCTACAGTGACAAGAACCCGGGTAACACACTCCTCATGACCCACAGTGAAGCCCTCGCCCTGGATACATATAAGACGAGGCGTAACCTCAACGTCCTGGTCACCGGGGCATCGGGTTCGGGCAAGACGCGCGGCTATGTC
PROTEIN sequence
Length: 152
MTSNRKMSPITWLILTLMGFYAGNIVSRPVRVSYMASHDVPAAINASLDAYKNPVPSMNRMDLIAGAAIAAIVLLALLYQYSGQHVTRDGEEHGSAAWASSTDMRPYSDKNPGNTLLMTHSEALALDTYKTRRNLNVLVTGASGSGKTRGYV