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NECEvent2014_3_6_scaffold_103

Alias: 173_004_scaffold_103

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_103_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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234..1097
DNA (864bp) protein (288aa)
Hydrolase n=37 Tax=Pseudomonas aeruginosa RepID=R9ZF34_PSEAI rbh
alpha/beta hydrolase fold family protein
Probable hydrolase {ECO:0000313|EMBL:AAG06133.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_103_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1347..3269
DNA (1923bp) protein (641aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase n=113 Tax=Pseudomonas RepID=SYT_PSEA8 rbh
NECEvent2014_3_6_scaffold_103_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3287..3820
DNA (534bp) protein (178aa)
Translation initiation factor IF-3 n=109 Tax=Pseudomonas RepID=IF3_PSEAE rbh
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
NECEvent2014_3_6_scaffold_103_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3882..4076
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=134 Tax=Gammaproteobacteria RepID=RL35_PSEA7
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_3_6_scaffold_103_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4100..4456
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=134 Tax=Pseudomonas RepID=RL20_PSEA7
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_3_6_scaffold_103_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4554..5570
DNA (1017bp) protein (339aa)
Phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=96 Tax=Pseudomonas RepID=SYFA_PSEAB rbh
NECEvent2014_3_6_scaffold_103_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5605..7983
DNA (2379bp) protein (793aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000313|EMBL:BAR67370.1}; EC=6.1.1.20 {ECO:0000313|EMBL:BAR67370.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
Phenylalanine--tRNA ligase beta subunit n=5 Tax=Pseudomonas aeruginosa RepID=Q02NN6_PSEAB rbh
NECEvent2014_3_6_scaffold_103_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7987..8289
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=135 Tax=Pseudomonas RepID=IHFA_PSEA7
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
NECEvent2014_3_6_scaffold_103_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8270..8626
DNA (357bp) protein (119aa)
Uncharacterized protein n=123 Tax=Pseudomonas RepID=A6V492_PSEA7
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:EQL40256.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_103_trna_1
unknown

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8716..8789
DNA (74bp)
transferRNA
NECEvent2014_3_6_scaffold_103_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..9327)
DNA (375bp) protein (125aa)
Uncharacterized protein n=12 Tax=Pseudomonas RepID=K1DAI9_PSEAI
hypothetical protein
Transposase {ECO:0000313|EMBL:EQL41913.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA0
NECEvent2014_3_6_scaffold_103_11
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9776..10123
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1E0K5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AAW73613.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae
NECEvent2014_3_6_scaffold_103_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10799..12442
DNA (1644bp) protein (548aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CJZ4_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFQ61558.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
NECEvent2014_3_6_scaffold_103_13
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12754..13002
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CMN9_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM61910.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
NECEvent2014_3_6_scaffold_103_14
unknown

Not on your lists

12983..13078
DNA (96bp) protein (32aa)

This feature has no annotations

NECEvent2014_3_6_scaffold_103_15
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13407..14402
DNA (996bp) protein (332aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=K1DAJ2_PSEAI rbh
hypothetical protein
Fic family protein {ECO:0000313|EMBL:KFJ90109.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
NECEvent2014_3_6_scaffold_103_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14537..19660
DNA (5124bp) protein (1708aa)
DNA helicase n=1 Tax=Pseudomonas aeruginosa 19660 RepID=U9AKM1_PSEAI rbh
DNA helicase
DNA helicase {ECO:0000313|EMBL:EZP05712.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH05
NECEvent2014_3_6_scaffold_103_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19802..22264
DNA (2463bp) protein (821aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CK01_PSEAI rbh
hypothetical protein
Tellurite resistance protein TerB {ECO:0000313|EMBL:EVT86984.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
NECEvent2014_3_6_scaffold_103_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22261..23556
DNA (1296bp) protein (432aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CMP5_PSEAI rbh
hypothetical protein
ATP-binding protein {ECO:0000313|EMBL:KGE68903.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
NECEvent2014_3_6_scaffold_103_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23531..25741
DNA (2211bp) protein (737aa)
Helicase n=6 Tax=Pseudomonas RepID=S0II01_PSEAI rbh
helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGE68902.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
NECEvent2014_3_6_scaffold_103_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25809..25889
DNA (81bp) protein (27aa)
Transposase n=1 Tax=Pseudomonas aeruginosa BWHPSA025 RepID=U8NYX9_PSEAI
transposase
Uncharacterized protein {ECO:0000313|EMBL:CEI21878.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
Displaying 21 items

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