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NECEvent2014_3_6_scaffold_7_31

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 34333..35127

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=13 Tax=Pseudomonas aeruginosa RepID=V5SRF7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 520
  • Evalue 7.40e-145
  • rbh
chpD; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 520
  • Evalue 2.10e-145
Transcriptional regulator {ECO:0000313|EMBL:AHB53677.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 520
  • Evalue 1.00e-144

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGCCGGCCTGCAACACGCGCGGATCGGCGCCTCCCTCGAGGTCGCCAGCGCCAGCCTGGCCGGGCACCGCTTCGAGAAGCACAGCCACGACGAGTTCGTCATCAGCGCCAACCTCTGCGGATTGGAAGATGTCTGGCTGGATGGCCGTACCTTCCAGGCCGACAGCGGCGACCTGACCCTCTACAACCCGGGGCAGATCCAGGGCGGCGGCGTCCGCGACGGCCAGCCCTGGCGCTTCGCCAGCCTCTATCTGCCTGCCGCCGAACTGGCGAGCAGCCTGGATCTTTCCTCCGTCGAGTTCGACCGCCCGCTGCTGCGCAATCCGGCGCTGGGCCGCGAGTTGGCCGCCAGCATCGAAGCCTTGCTGGCCAGCGACCGCTTCGCCCGCGAACGGGGCGAGGAGCGCCTGCTGGAGTTCCTCGGCCGCCTGCTGGCGGCGAGCGGCACCCGCCTGCCGCAGAGGGCCGATCCTGGGCGCCCGGCTGTCGCCCGCCTGCAGGCGCTGCTCGCCGAGCGCCTGGCCGAGCCGCCGGACCTGGATGGGATGGCGGAGCAGGTGGGCCTGTCGAAATACCACCTGCTGCGGGCGTTCAAGAAGGCCACCGGGCTCAGCCCGCGACAGTGGAGCATGCAATTGCGCACCCGCCGCGCCCTCGGCCTGTTACGCCGTGGCCTGGCGGTGGGCGAGGTGGCCCACGCCCTGGGCTTCGCCGACCAGAGCCACCTGACCCGTTACTTCACCAGCGCCTACGGCATTTCGCCGGGCCGCTACCAGCGCGCTGTGCGCGGCTGA
PROTEIN sequence
Length: 265
MAGLQHARIGASLEVASASLAGHRFEKHSHDEFVISANLCGLEDVWLDGRTFQADSGDLTLYNPGQIQGGGVRDGQPWRFASLYLPAAELASSLDLSSVEFDRPLLRNPALGRELAASIEALLASDRFARERGEERLLEFLGRLLAASGTRLPQRADPGRPAVARLQALLAERLAEPPDLDGMAEQVGLSKYHLLRAFKKATGLSPRQWSMQLRTRRALGLLRRGLAVGEVAHALGFADQSHLTRYFTSAYGISPGRYQRAVRG*