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NECEvent2014_3_6_scaffold_7_51

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 59985..60605

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=112 Tax=Pseudomonas RepID=I6SLS3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 418
  • Evalue 3.10e-114
  • rbh
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 418
  • Evalue 8.70e-115
Transcriptional regulator {ECO:0000313|EMBL:EZO91322.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 418
  • Evalue 4.30e-114

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGGCACACACAAGATCGAGATCCGCCGCCGCAACGTCGAGAAGATTCTCCTGGCCGCCGAAAAAGTCTTCGCCGAAAAAGGCTACGCCGGCACCTCCATGGGCAACATCGCCGAAGAAGCCGAACTGCCGCGCTCCAACCTGCACTACTACTTCAGCACCAAGGACGAGCTGTACCGCGACGTCCTCCTCGGCCTGCTCGAGGTCTGGAAGCAGGACGCCCTCTGCTTCGAGATGTTCGATGACCCAAGGGTGGTATTGACCAGCTATATCCGCGCGAAGATGAACCATTCGCGCACCCGCCCGCATGGCTCCAAGGTCTGGGCCAACGAAATCATGCATGGCGCGCCGCTGCTCGGCGCCACCCTCGACGACAGCCTCTACGAATGGGCCAAGATGAAGGAGGCGAAGATCCGCCAGTGGGTCGAGGAAAAGCGCATCCTGTCGATCGAGCCGAGCAGCCTGCTCTACATGATCTGGGCCTCCACCCAGCACTACGCCGACTTCGGCTACCAGGTCGAGGTGCTCAACGGCCACCAGCCGCTCAGCGACATGCAGTTCGAAAGGGCGGTACAGACGGTGACCAGCGTGGTCCTGCGCGGAATCGGATTGGAGCCCTGA
PROTEIN sequence
Length: 207
MGTHKIEIRRRNVEKILLAAEKVFAEKGYAGTSMGNIAEEAELPRSNLHYYFSTKDELYRDVLLGLLEVWKQDALCFEMFDDPRVVLTSYIRAKMNHSRTRPHGSKVWANEIMHGAPLLGATLDDSLYEWAKMKEAKIRQWVEEKRILSIEPSSLLYMIWASTQHYADFGYQVEVLNGHQPLSDMQFERAVQTVTSVVLRGIGLEP*