ggKbase home page

NECEvent2014_3_6_scaffold_7_68

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(82834..84210)

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase DbpA n=40 Tax=Pseudomonas RepID=E3A5X6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 458.0
  • Bit_score: 893
  • Evalue 1.20e-256
  • rbh
dbpA; ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 458.0
  • Bit_score: 891
  • Evalue 1.00e-256
RNA helicase {ECO:0000313|EMBL:EVT84049.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 458.0
  • Bit_score: 891
  • Evalue 5.10e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
GTGACCTCCACCGCTTTCTCCTCGCTGCCGCTTTCCGCGGACCTCCTGGCCAATCTCGACTCCCTCGGTTACCGGGAGATGACGCCGATCCAGGCGCAGAGCCTGCCGCTGATCCTCCAGGGCCACGACCTGATCGCCCAGGCCAAGACCGGCAGCGGCAAGACCGCGGCTTTCGGCCTCGCCCTGCTCAGCCCGCTGAACCCGCGCTACTTCGGCTGCCAGGCGCTGGTGCTGTGCCCGACCCGCGAACTGGCCGACCAGGTCGCCAAGGAGATCCGCCGGCTGGCCCGCGCCGCCGACAACATCAAGGTCCTGACCCTCTGCGGCGGCGTCCCCTACGGCCCGCAGGTGGCTTCGCTGGAGCACGGCGCGCACGTGGTGGTCGGCACCCCGGGGCGCATCCAGGAGCACCTGCGCAAGGGCACCCTGGTCCTCGACGGGCTCAATACCCTGGTCCTCGACGAAGCCGACCGGATGCTCGACATGGGCTTCTACGACAGCATCGCCGAGATCATCGGCCAGCTCCCCGAGCGCCGGCAGACCCTGCTGTTCTCCGCCACCTACCCGGACGGCATCGAGAAGCTGGCGAAGACCTTCATGCGCGATCCGCGACAGGTGAAGGTCGAGTCGCTGCACGCCGACAGCCAGATCGAGCAGCGCTTCTTCGAGATCGATCCGAAGCAGCGCATGGACGCCGTGGTACGCCTGCTCCAGCATTTCCGGCCGCAGTCCTGCGTGGCCTTCTGCCAGACCCGCCAGCAGTGCCAGGAGCTGGCCGACGCACTGAAGGCGCAGCGGATTTCCGCCCTGGCCCTGCACGGCGACCTGGAGCAGCGCGAGCGCGACCAGGTCCTGACGGTGTTCGCCAACCGCAGTTGCAACGTACTGGTGGCCACCGACGTGGCCGCCCGCGGGCTGGACATCGCCGCCCTGGAAACGGTGATCAACGTCGAGCTGGCGCGCGACCCGGAGGTCCACATCCATCGCATCGGACGCAGCGGTCGCGCCGGCGAGAAAGGCCTGGCCCTGTCGCTGGTGGCGCCGGCCGAGGCCAGCCGTGCGCAGGCCATCGAGGACCTGCAGAAGCAGCCGCTGGCCTGGTACGCCCTCGGCCAGTTGAAGGCCAGCCCGGAGCCATTGCTGCCGCCGATGAGCACCCTGTGCATCGCCGGCGGACGCAAGGACAAGGTGCGCCCCGGCGACCTGCTCGGTGCCCTCACCGGCGACGCCGGGCTGCCCGGCAGCGCGGTGGGCAAGATCGCCATCTTCGACTTCCAGGCCTTCGTCGCCATCGAGCGCGGCCTCGCCCACCAGGCCCTCAAGCGCCTGAGCGAAGGCAAGATCAAGGGGCGCTCGTTCAAGGTCCGCCTGCTGTAG
PROTEIN sequence
Length: 459
VTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGLALLSPLNPRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGPQVASLEHGAHVVVGTPGRIQEHLRKGTLVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQLPERRQTLLFSATYPDGIEKLAKTFMRDPRQVKVESLHADSQIEQRFFEIDPKQRMDAVVRLLQHFRPQSCVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFANRSCNVLVATDVAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGEKGLALSLVAPAEASRAQAIEDLQKQPLAWYALGQLKASPEPLLPPMSTLCIAGGRKDKVRPGDLLGALTGDAGLPGSAVGKIAIFDFQAFVAIERGLAHQALKRLSEGKIKGRSFKVRLL*