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NECEvent2014_3_6_scaffold_7_85

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(101844..102815)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane sensor n=5 Tax=Pseudomonas aeruginosa RepID=K1D4C3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 323.0
  • Bit_score: 636
  • Evalue 1.90e-179
  • rbh
fiuR; transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 323.0
  • Bit_score: 634
  • Evalue 1.60e-179
Transmembrane sensor {ECO:0000313|EMBL:EZO91356.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 323.0
  • Bit_score: 633
  • Evalue 2.30e-178

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
GTGAGCGCCGACGATCGTCATTCGCCGGTACGCGCGCGGGTGCTCGACGAAGCCATCGCCTGGCAATTGCTGCTCGACTCCGGCGAAGCCCATCCCGACGATCACCGCGCCTTCCACCGCTGGTACGCGGCGCATCCCGAACACGAACGCGCCTGGGAACAGCTCGGCGGCCTCGACCGGCACCTGGCGAGAGCCGCCAACGGGCCGGCACGCAACGCCCTGCTGTCCGGCAACGCACGCTTCAAGCGCCGCCTGCGCCGGCTCGGCGGCAGCGCCCTGGGGCTAGTGCTGGCGCTGGGCGTCGGGCTCGGCGTGGCCAACCGCTACGTCCCGGTCCGCTACCTGCTGGCCGATGCCTACAGCGCCACCGGCGAGCAGCGCGAGCTGACCCTCCCGGATGCCACCCATGTGCGCCTGAACAGCCGCAGCGCCATCGACGTCCGCTTCGACGGCGAACGCCGCCAGGTCGTGCTACTGGCCGGCGAGATCCTGGTGGAAACCGCCCATGGCGACCCGCGCCCCTTCGTGGTCAGCAGCGCCGATGGCGACATGCGCGCCCTCGGCACGCGCTTCCTGGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGCCAGCAGGTGCTGATCCTGCCGCAAGGCCTGCGGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCCGGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCTGAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGA
PROTEIN sequence
Length: 324
VSADDRHSPVRARVLDEAIAWQLLLDSGEAHPDDHRAFHRWYAAHPEHERAWEQLGGLDRHLARAANGPARNALLSGNARFKRRLRRLGGSALGLVLALGVGLGVANRYVPVRYLLADAYSATGEQRELTLPDATHVRLNSRSAIDVRFDGERRQVVLLAGEILVETAHGDPRPFVVSSADGDMRALGTRFLVRREEPGTRLTVLQSAVAARAETLSEERVIKEGQQVLILPQGLRASEAAPALAGAWAQGMLVVENARLADLVAELGRYSPALLRVDPSIADLRVTGSFPLKDTRLALQALEPSLPVRSVRHNAWWFEVVPR*