ggKbase home page

NECEvent2014_3_6_scaffold_106_10

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 7213..10206

Top 3 Functional Annotations

Value Algorithm Source
Transposase, Tn3 family n=28 Tax=Pseudomonas RepID=A4VQ12_PSEU5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 997.0
  • Bit_score: 1971
  • Evalue 0.0
  • rbh
Tn3 family transposase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 997.0
  • Bit_score: 1971
  • Evalue 0.0
TnpA {ECO:0000313|EMBL:AJG14385.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 997.0
  • Bit_score: 1971
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas plecoglossicida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2994
ATGCCGGTCGGTTTTCTGACTCAAGAGCAACGCGACGGTTTTGGCCGCTATGTTGATTCGCCCAGCCGTGAAGAGCTGGAACGTTACTTCCACCTGAGCGATGAAGACCGTGAAGCCATCCAGGTGCTGCGGGGTAACCATAACCGTCTGGGTTATGCCGTTCTGCTGACCACCGTCCGCTTCGTTGGCGTTCTGCCGGACAAGCCCGCCGCCGTGCCGGTGGAAGTCCTGCAGGTGCTTTGCCGACAACTGGCGATTCCAGACCCCGACTGCCTCCAGCGCTATAGCGATCATCGCCGCTGGATACATGCCACCGATATTCAGAACCGCTTTGGCTATCGTCATTTCACCGATCCGGGCATCGGCTTTCGCTTGAGCCGCTGGCTGTATGCCCTCTGCTGGACGGGCACCGACCGGCCGGGAGTGCTGTTTGAGCGAGCCACCTCGTGGCTGTTCACACAGAAAGTCCTCCTGCCTGGTGTGTCTCAACTAGAGCGCTTTATCGCCCAGTTGCGCAGTCGGGTCGAAGAACGCCTCTGGTTTACGCTGGGCCGCAGCGTGACTGAGGAACAGCGATTGCAACTGCAAGACTTGCTGACGGTGGCCGAAGGCAACCGCAGCTCCCGGCTGGATCAATTGCGCTCCGGCCCGGTCATGGTCAGTGGCCCCGCGTTGATTCGGGCACTGCGCCGGCTCGATGACGTGCGCGGCATCGGCATCACCTTGCCGGCGGCGGCGCACATCCCTCCCAGCCGTATCGCCGCCCTGGCCCGCTTCGCCAACACGGCCAAGGTCACCGCGATTAATCGGCTGCCGGCGTCGCGGCGGATGGCGACACTGGTGGCCTTCGCACTCTGCCTGGAGGCGACTGCGCACGACGACGCACTGGAAGTCCTGGAGGCCTTGCTGCGCGACCTGTTCAGCAACGCGGAGAAGGCCGACAAGAAAGCCCGCATGCGCAGCCTGAAAGACCTGGATCGGTCGGCCGCGACGCTCGCCGCCGCGTGCAAGGTCGTGCTGGACAGCTCGATCAGCGATGACAACGTGCGCGCCCGGCTGTTCAACGACCTGCCGAGGACCACCCTGGAAAAGGCCCTGGAAGAGGTCAACGCGCTGATCCGCCCGGTAGATGACGTCTATTTTCTTGCATTGGAAGCGCGCTACCGCAGCGTGCGCCGCTTCCTGCCCGACCTGCTCAAGCACATCCGCTTCGGCTTCAGCCCGGCCGGCAAGGGCGTGGCGGCTAGTCTGGAGTGGCTGCAACTGAACCTGCCGCGCCGGAAGCCAGAGGATGACGCGCCGCAGGAGATCGTGGCCAAGGCTTGGCAGAAGCACATCACCCGCGAAGATGGCTCCCTCGACATGGGTGCCTATGTGTTCTGCACGCTCGATGCGCTGCGCACGGCCCTGCGCCGCCGCGATGTCTTCGTCTCGCCCAGTTGGCGCTATGCCGACCCGCGCCTTGGCCTGCTCGACGGTGCCGAATGGCTGGCGGCGCGACCGATCATCTGCCGGTCACTGGGCCTGACCATCGACGCCAAAACCACCCTGGACGCCTTGTCCGTCGAGCTGGATGCAACCTGGCTGGCAGTAGCCGCGCGCCTGCCCGACAACCCGGCGATTCAACTGAGCGAGAACACCGAGGGCAAGACCGAACTGTCGCTCGGGGCGCTGGACAAGCTGGACGAGCCCTGCTCGTTGCTGCAACTGCGGGCGGCCGTGTCTGACCTGATGCCGCGTGTCGATCTGCCGGAAATCCTCTTGGAAATCGCCGCCCGCACTGGCTTTTCCGAGGCCTTCACCCATGTCTCCGAACGCAATGCACGCGCCGACAACCTGGTCACCAGCCTCTGCGCGGTGCTGTTGGGCGGGGCCTGCAACACCGGCCTGGAGCCCTTGATCCGCACCGACAACCCGGCGCTGCGCCGTGACCGGCTGTCCTGGGTCAGCCAGAATTATATCCGCGACGACACCCTGTCAGCGGCTAACGCCATCCTGGTCGGAGCGCAAAGCCAACTGGAACTGGCCCAAGTCTGGGGTGGCGGCGAGGTCGCCTCCGCCGATGGCATGCGCTTCGTCGTACCGGTGCGCACCGTGCATGCCGGCCCCAATCCGAAGTATTTCGGCACCGGCCGGGGTGTCACCTGGTACAACCTGATTTCCGACCAATTCTCCGGCCTCAACGCCATCACCGTGCCCGGCACGCTGCGCGACAGCCTGGTGTTGCTGGCGGTCGTGCTGGAACAGCAGACCGAGTTGCAGCCGACGCAAATCATGACCGACACCGGGGCCTACAGCGATGTGGTGTTCGGGCTCTTCCGCCTACTTGGCTACCACTTCAGTCCGCGGCTGGCCGATGTCGGCGGTACCCGCTTCTGGCGCACGCGCCCGGACGCGGACTACGGCAAGCTCAACGGGCTGGCCCGCCAGTCGGTCAAACTCGACCTGATCGCCGAGCACTGGGACGACCTGCTGCGCCTGGCCGGCTCGCTCAAACTCGGCCGGGTGCCGGCGACTGGCATCATGCGCACGCTGCAAACGGGAGATAGACCCACCCGGCTGGCCCAGGCGCTGGCCGAATTCGGGCGGATCGAAAAGACTCTGCACACGTTGACCTATATCGACGACGAGTCCAAGCGCCGCGCCACCCTGACCCAGTTGAACCGAGGCGAAGGCCGGCACAGCCTGGCCCGCGCCGTGTTCCACGGCAAACGCGGCGAGCTCCGCCAGCGCTACCGCGAAGGCCAGGAAGACCAGCTCGGTGCTCTGGGCCTGGTGGTGAACATCATCGTGCTGTGGAACACCCTCTACATGACGGCGGCCGTGGAACGGCTCAAGCAGCACGGCTATCCAGTGCTGGAAGAGGATTTGGCCCGGCTATCGCCGCTGATCTACGAGCACATCAACATGCTCGGGCGGTATTCCTTTGCGGTACCGGAAGAAGTTGCGCGCGGCGAGCTGCGGCCACTGCGTAATCCAGACGACGACCTGTGA
PROTEIN sequence
Length: 998
MPVGFLTQEQRDGFGRYVDSPSREELERYFHLSDEDREAIQVLRGNHNRLGYAVLLTTVRFVGVLPDKPAAVPVEVLQVLCRQLAIPDPDCLQRYSDHRRWIHATDIQNRFGYRHFTDPGIGFRLSRWLYALCWTGTDRPGVLFERATSWLFTQKVLLPGVSQLERFIAQLRSRVEERLWFTLGRSVTEEQRLQLQDLLTVAEGNRSSRLDQLRSGPVMVSGPALIRALRRLDDVRGIGITLPAAAHIPPSRIAALARFANTAKVTAINRLPASRRMATLVAFALCLEATAHDDALEVLEALLRDLFSNAEKADKKARMRSLKDLDRSAATLAAACKVVLDSSISDDNVRARLFNDLPRTTLEKALEEVNALIRPVDDVYFLALEARYRSVRRFLPDLLKHIRFGFSPAGKGVAASLEWLQLNLPRRKPEDDAPQEIVAKAWQKHITREDGSLDMGAYVFCTLDALRTALRRRDVFVSPSWRYADPRLGLLDGAEWLAARPIICRSLGLTIDAKTTLDALSVELDATWLAVAARLPDNPAIQLSENTEGKTELSLGALDKLDEPCSLLQLRAAVSDLMPRVDLPEILLEIAARTGFSEAFTHVSERNARADNLVTSLCAVLLGGACNTGLEPLIRTDNPALRRDRLSWVSQNYIRDDTLSAANAILVGAQSQLELAQVWGGGEVASADGMRFVVPVRTVHAGPNPKYFGTGRGVTWYNLISDQFSGLNAITVPGTLRDSLVLLAVVLEQQTELQPTQIMTDTGAYSDVVFGLFRLLGYHFSPRLADVGGTRFWRTRPDADYGKLNGLARQSVKLDLIAEHWDDLLRLAGSLKLGRVPATGIMRTLQTGDRPTRLAQALAEFGRIEKTLHTLTYIDDESKRRATLTQLNRGEGRHSLARAVFHGKRGELRQRYREGQEDQLGALGLVVNIIVLWNTLYMTAAVERLKQHGYPVLEEDLARLSPLIYEHINMLGRYSFAVPEEVARGELRPLRNPDDDL*