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NECEvent2014_3_6_scaffold_106_23

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(19893..20255)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4PT36_PSECO similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 230
  • Evalue 1.20e-57
Putative tnpA repressor TnpC {ECO:0000313|EMBL:CEG54472.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas x similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 120.0
  • Bit_score: 235
  • Evalue 4.00e-59
Tn4652, tnpA repressor protein TnpC similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 120.0
  • Bit_score: 158
  • Evalue 9.50e-37

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Taxonomy

Pseudomonas xanthomarina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGATTGAGGTTCCGCCGGCGTCTTTTCAGACTACTCCTTACGGCGAAGTGGATTCTGTAGCACTGGAAAGGCTGCGAGCGAACTTCGACACCACCCGGCTTCTGCAGTTGGTTGGCCGACTGGATGCATGTCTGGCAGGGTTGGGTGGAATTAATGACATGCGCGACGAGCTACTGCGGTTGCATGCAATGGCGCTGACGGTAATCGAGGGCGTCGTACCGACAGTCCCAACTGAGAATGTCAGCATTTGGGAAGCGGCCGAATCGGTACGGCTAGATCTCGAAACGCTGAGTTCTTGGATACGCATTGCTCAGATGACGATTGCACCGTTGGGTGATCTTGTTCCAGGCCATGAACGATAG
PROTEIN sequence
Length: 121
MIEVPPASFQTTPYGEVDSVALERLRANFDTTRLLQLVGRLDACLAGLGGINDMRDELLRLHAMALTVIEGVVPTVPTENVSIWEAAESVRLDLETLSSWIRIAQMTIAPLGDLVPGHER*