ggKbase home page

NECEvent2014_3_6_scaffold_55_19

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 17368..18786

Top 3 Functional Annotations

Value Algorithm Source
Porin n=5 Tax=Pseudomonas aeruginosa RepID=K1CTM0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 472.0
  • Bit_score: 963
  • Evalue 7.70e-278
  • rbh
opdJ; porin similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 472.0
  • Bit_score: 963
  • Evalue 2.20e-278
Probable porin {ECO:0000313|EMBL:AAG05808.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (str similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 472.0
  • Bit_score: 958
  • Evalue 2.70e-276

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGCCTGATTCCTCCATGAAGCGCGGGGCTACGCTCTGCCTTGCCCTTGCCATAGGTCCGGGCTCGCTCCTGGCCGACGACTCCCTGGGCCATCGCGACAACATCAGCACCGGCCTGAACCAGCGGCAGAAAGCCGAAATGAAGGTGCCGCCGGGCTTCGTCGAAGGCTCGACGCTGAACGGTTTCCTCCGCAACTACTATTTCGCCCGCGACAACCACGACACCCCGTCCCGCCGCGACCAGCGCGAATGGGCCCAGGGCCTGATGCTGTCGTTCCGCTCCGGCTATACCGACACGCCGATAGGCATCGGCCTGGATGCGCACGCCTTCTACGGCCTGCGCCTGGACGGCGGTGGCGGCAGCGGCGGTGCCGGCGTGCTGCCGCTGGACTCCGCCGGTCGCCCCGCCGACAGCTTCTCGGCGGCCGGCGCGGCCCTCAAGCTGCGCGGCCTGGACAGCCTGCTGAAGATCGGCGACCAGTTGCTGGAGAACCCGGTGATCGCCAGCGGCGTCAGTCGCATGGTGCCGCAGAGCTACCGTGGCGTGACCCTGAAGAACTACCATTTCCGCGCGCTCGAACTGGACGCCGGCTTCGTCGAAGCCACCCGCCTGCGCAACCAGAGCGGCCATAGTCATCTCACCAGCGGCTACGGCAACGGCACCAAGGGCGGTATCGCCGCCGATCGCGAAAGCCCGCACATCGCCTGGCTGGGCGCCAGCTACAGCGCCCCCGGCGGCAGCCAGGCGACGCTCTACAGCGGCCGCCTGGCGGATATCTGGAACCAGCACTACCTCGGCCTCAGCCAGCCGTGGCGGCTTTCCAGCCAATTGACCCTGACGCCCTGGCTGCATTACTACAAGACCCGCGACCAGGGCCGCAGCCAGCTCGGCCGGATCGACAACGACCTCTACAACGCCGGGCTGACCCTGGCCGGCGGCGGCCAGTCGCTGAGCCTCAGCCTGCAAAAGGTCGATGGCGACACCCCGTTCGACTTCATCGCGCAGAACGACCGGACCTTCCTCTACGAAAGCAACGCCATGCAGTACGCCGACTTCAACGGCCCCGGCGAGCGCTCGTGGAAGATCCAGTACCAGGCCAGCCTGGCCTTCCTCGCCGCCCCGGACTGGCAATTCGGCGCCGCCTACGGCCGTGGCCAGGCCGACCTGACCCGGGTCGACCCGGACAGCGCGGGCTACGGCTACCTCTACAACCCCAATGGCAAGAACGCCCAGCACTGGGAACGCGACCTGTCGCTGCGCTATGCCTTCCCCGCCGGCCCGGCCAAGGGCCTCAGCGTGACCCTGCGCTGGGCCACCCACCGCCCCGGCGAAGGCTACACCGCCCCCGGCAACACCCGCGGCAACTCCAGCTCCGACGAATACCGGGTGGTGGTCGACTACCCGATCAGGTTGCTCTGA
PROTEIN sequence
Length: 473
MPDSSMKRGATLCLALAIGPGSLLADDSLGHRDNISTGLNQRQKAEMKVPPGFVEGSTLNGFLRNYYFARDNHDTPSRRDQREWAQGLMLSFRSGYTDTPIGIGLDAHAFYGLRLDGGGGSGGAGVLPLDSAGRPADSFSAAGAALKLRGLDSLLKIGDQLLENPVIASGVSRMVPQSYRGVTLKNYHFRALELDAGFVEATRLRNQSGHSHLTSGYGNGTKGGIAADRESPHIAWLGASYSAPGGSQATLYSGRLADIWNQHYLGLSQPWRLSSQLTLTPWLHYYKTRDQGRSQLGRIDNDLYNAGLTLAGGGQSLSLSLQKVDGDTPFDFIAQNDRTFLYESNAMQYADFNGPGERSWKIQYQASLAFLAAPDWQFGAAYGRGQADLTRVDPDSAGYGYLYNPNGKNAQHWERDLSLRYAFPAGPAKGLSVTLRWATHRPGEGYTAPGNTRGNSSSDEYRVVVDYPIRLL*