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NECEvent2014_3_6_scaffold_98_28

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(25182..25520)

Top 3 Functional Annotations

Value Algorithm Source
Candidate type III effector Hop protein n=3 Tax=Pseudomonas aeruginosa RepID=Q7WY27_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 112.0
  • Bit_score: 225
  • Evalue 2.70e-56
type III effector Hop protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 226
  • Evalue 3.50e-57
Candidate type III effector Hop protein {ECO:0000313|EMBL:AAP84157.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 226
  • Evalue 1.70e-56

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
GTGAACACTCCACATCCATCCCTTCGCCGAAGCTGCCTGGCCGTCTTGGCCTGCAGTGCGCTGGTCGCACAGGGAGCTTTCGCAGCGAGCGCCTCCGAGCAGGCGAACCTGGAGGTGATGATCCGGCAGCTCAACGCCCTCGAGGACACCGCCCGCCGCAGTGCCCAGGGCGCCGATGAGCCCGGACAGCGCTTCTACTTCGACTACCCGCGCCTGGCCGCTGACCTGCAGCGCATCCGCCAAGGCCTGCAGGACTACATGACGCCCAGCCGCGCCCAACCGCGTGACCCTTCCGACTTATCAGGGAATTACACCCTGCGCGGAGGGCCGATGCCATGA
PROTEIN sequence
Length: 113
VNTPHPSLRRSCLAVLACSALVAQGAFAASASEQANLEVMIRQLNALEDTARRSAQGADEPGQRFYFDYPRLAADLQRIRQGLQDYMTPSRAQPRDPSDLSGNYTLRGGPMP*