ggKbase home page

NECEvent2014_3_6_scaffold_166_5

Organism: NECEvent2014_3_6_Staphylococcus_epidermidis_32_14

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5567..5806

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=70 Tax=Staphylococcus epidermidis RepID=Q5HPN7_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 2.20e-36
host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 6.20e-37
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 3.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Staphylococcus sp. DORA_6_22 → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
ATGATTGCAAACGAAAACATCCAAGACCAAGCACTAGAGAACTTTAAATCGGAAAAAACTGAAGTCACAATTTTCTTTTTAAATGGCTTTCAAATGAAAGGTGTCGTTGAAAATTATGACAAATATGTTGTAAGTTTAAATTCTCAGGGTAAGCAACATCTGATTTACAAACATGCGATCAGCACTTTCACTGTAGATAATGAATCGTCTGAAGCAACTGAAGTGAATAGTGAAGAATAA
PROTEIN sequence
Length: 80
MIANENIQDQALENFKSEKTEVTIFFLNGFQMKGVVENYDKYVVSLNSQGKQHLIYKHAISTFTVDNESSEATEVNSEE*