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NECEvent2014_3_6_scaffold_432_3

Organism: NECEvent2014_3_6_Staphylococcus_epidermidis_32_14

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1330..2067

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 245.0
  • Bit_score: 482
  • Evalue 7.60e-134
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 245.0
  • Bit_score: 482
  • Evalue 3.80e-133
Pseudouridine synthase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E4C4_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 245.0
  • Bit_score: 485
  • Evalue 2.40e-134
  • rbh

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
ATGAGTAAAGAAAAAGAAAGATTACAAAAAAGAATCGCTAAAAGCGGGTATACATCTCGTCGAAAAGCAGAAGTACTTATCACTGAAGGACGAGTTAAAGTCAATGGGCAAACTGTAACAGAATTAGGGTCCAAAGTGATGCCATCAGATTTAGTTGAAGTTGATGGTATTAAAATCGAACAAGAAGACAAAATTTATATTTTGTTTTATAAGCCAACTCAAGTCATTACGAGTGTTTCTGATGATCGTGGACGTAGGGTGGTTACGGATTACTTTGATGATCTAGAATCACGTATTTATCCGGTTGGACGATTAGATTATGACACATCTGGAGTTTTATTATTAACTAATGATGGAGAATTTACTAATTTGATGACACATCCTCGATATCACATTAAAAAGAAATACGTCGCTAAATTAAAAGGTTATTTAATGAGAGAGGAAATTAAGCAACTTGAAAAAGGAATAGAATTAGAAGATGGTTACACACAACCAGCACAAGTTAAAATAAAAAAGCAAGATAAAGAAAAAAATACGACTTTAGTTGAAATTACAATTAGTGAAGGGCGAAATAGACAAGTTAGACGTATGTTTGAGTATTTCGGTCATCAAGTTAATAAGTTAACAAGAATTCAATTTGGCCCTATAGATTTAAAAGGTTTGAACGCCGGTGAAGGAAGAGTTCTTACACCACATGAAGTAAAAATATTAAGACATTTGGCAGAAAACGGTAAATAA
PROTEIN sequence
Length: 246
MSKEKERLQKRIAKSGYTSRRKAEVLITEGRVKVNGQTVTELGSKVMPSDLVEVDGIKIEQEDKIYILFYKPTQVITSVSDDRGRRVVTDYFDDLESRIYPVGRLDYDTSGVLLLTNDGEFTNLMTHPRYHIKKKYVAKLKGYLMREEIKQLEKGIELEDGYTQPAQVKIKKQDKEKNTTLVEITISEGRNRQVRRMFEYFGHQVNKLTRIQFGPIDLKGLNAGEGRVLTPHEVKILRHLAENGK*