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NECEvent2014_4_1_scaffold_254

Alias: 174_001_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_254_1
unknown

Not on your lists

3..107
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_254_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(240..1199)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D5U3_CLODI rbh
Domain of uncharacterised function (DUF1848) {ECO:0000313|EMBL:CEQ11324.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clos
hypothetical protein
NECEvent2014_4_1_scaffold_254_3
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1196..2101)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VG69_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR43493.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
NECEvent2014_4_1_scaffold_254_4
unknown

Not on your lists

comp(2182..3081)
DNA (900bp) protein (300aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_254_5
unknown

Not on your lists

comp(3208..3798)
DNA (591bp) protein (197aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_254_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4010..4609)
DNA (600bp) protein (200aa)
Resolvase n=2 Tax=Clostridium butyricum RepID=B1R102_CLOBU
Resolvase {ECO:0000313|EMBL:EEP55202.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
resolvase
NECEvent2014_4_1_scaffold_254_7
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(4795..5874)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Lactobacillus mali KCTC 3596 = DSM 20444 RepID=J0URP2_9LACO
hypothetical protein Tax=GWB2_Planctomycetes_41_19_curated
hypothetical protein
NECEvent2014_4_1_scaffold_254_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6531..7439)
DNA (909bp) protein (303aa)
Integrase family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBP0_9CLOT rbh
Integrase family protein {ECO:0000313|EMBL:CDA09819.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
integrase family protein
NECEvent2014_4_1_scaffold_254_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7709..8170)
DNA (462bp) protein (154aa)
Probable transcriptional regulatory protein CPR_1922 n=10 Tax=Clostridium perfringens RepID=Y1922_CLOPS
Probable transcriptional regulatory protein CPE1954 {ECO:0000255|HAMAP-Rule:MF_00693}; Hyp27; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
hypothetical protein
NECEvent2014_4_1_scaffold_254_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8296..8949)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XJ08_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81661.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_254_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8955..10361)
DNA (1407bp) protein (469aa)
GntR family transcriptional regulator/aminotransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CXY3_CLOPF rbh
GntR family transcriptional regulator/aminotransferase {ECO:0000313|EMBL:EIA16497.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
GntR family transcriptional regulator
NECEvent2014_4_1_scaffold_254_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10376..11278)
DNA (903bp) protein (301aa)
Nucleotidyltransferase domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V055_CLOPF rbh
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EDT72840.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
nucleotidyltransferase domain-containing protein
NECEvent2014_4_1_scaffold_254_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11321..11794)
DNA (474bp) protein (158aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXY5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16499.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_254_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11926..13719)
DNA (1794bp) protein (598aa)
GTPase HflX n=3 Tax=Clostridium perfringens RepID=Q0TP01_CLOP1 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
GTP binding protein
NECEvent2014_4_1_scaffold_254_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13826..14350
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=9 Tax=Clostridium perfringens RepID=H7CXY7_CLOPF rbh
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EIA16501.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_1_scaffold_254_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14384..15073)
DNA (690bp) protein (230aa)
Sporulation protein YunB n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNZ9_CLOP1 rbh
Sporulation protein YunB {ECO:0000313|EMBL:EDS80430.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS
yunB; sporulation protein YunB
NECEvent2014_4_1_scaffold_254_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15210..17702
DNA (2493bp) protein (831aa)
Penicillin-binding protein, 1A family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHI3_CLOPF rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDT25338.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
1A family penicillin-binding protein
NECEvent2014_4_1_scaffold_254_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17996..19396
DNA (1401bp) protein (467aa)
Sodium:alanine symporter family protein n=2 Tax=Clostridium perfringens RepID=B1RLA4_CLOPF rbh
Sodium:alanine symporter family protein {ECO:0000313|EMBL:EDT72789.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
amino acid carrier protein
NECEvent2014_4_1_scaffold_254_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19433..19825)
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XIZ8_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:EDT27823.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_1_scaffold_254_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19873..20949)
DNA (1077bp) protein (359aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLA6_CLOPF rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT27714.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
GNAT family acetyltransferase
NECEvent2014_4_1_scaffold_254_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21275..21814
DNA (540bp) protein (180aa)
DNA-binding protein n=10 Tax=Clostridium perfringens RepID=H7CXZ3_CLOPF rbh
DNA-binding protein {ECO:0000313|EMBL:EDT72747.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
DNA-binding protein
NECEvent2014_4_1_scaffold_254_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21837..22895
DNA (1059bp) protein (353aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostri
Spermidine/putrescine ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=H7CXZ4_CLOPF rbh
spermidine/putrescine transport ATP-binding protein pota
NECEvent2014_4_1_scaffold_254_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22898..23743
DNA (846bp) protein (282aa)
Spermidine/putrescine ABC transporter, permease protein PotB n=8 Tax=Clostridium perfringens RepID=H7CXZ5_CLOPF rbh
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EIA16450.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
potB; spermidine/putrescine ABC transporter permease PotB
NECEvent2014_4_1_scaffold_254_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23737..24537
DNA (801bp) protein (267aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=2 Tax=Clostridium perfringens RepID=H7CXZ6_CLOPF rbh
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:EIA16451.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
potC; spermidine/putrescine ABC transporter permease PotC
NECEvent2014_4_1_scaffold_254_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24539..25621
DNA (1083bp) protein (361aa)
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein n=4 Tax=Clostridium perfringens RepID=Q0TNZ0_CLOP1 rbh
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein {ECO:0000313|EMBL:EDT72772.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
NECEvent2014_4_1_scaffold_254_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25863..26192)
DNA (330bp) protein (110aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=9 Tax=Clostridium perfringens RepID=NDK_CLOP1
ndk; nucleoside diphosphate kinase
NECEvent2014_4_1_scaffold_254_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26377..26646
DNA (270bp) protein (90aa)
Acylphosphatase n=5 Tax=Clostridium perfringens RepID=ACYP_CLOP1
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
acylphosphatase
NECEvent2014_4_1_scaffold_254_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26786..26941)
DNA (156bp) protein (52aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY00_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16259.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_1_scaffold_254_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27111..27677)
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BPV3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16252.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_1_scaffold_254_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27856..29127
DNA (1272bp) protein (424aa)
D-alanyl-D-alanine carboxypeptidase family protein n=4 Tax=Clostridium perfringens RepID=H7CY02_CLOPF rbh
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EIA16457.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
dacF; D-alanyl-D-alanine carboxypeptidase
Displaying items 1-30 of 31 in total

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