ggKbase home page

NECEvent2014_4_1_scaffold_116_28

Organism: NECEvent2014_4_1_Clostridium_perfringens_28_318

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 35033..35779

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 494
  • Evalue 7.50e-137
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 493
  • Evalue 3.40e-137
tRNA pseudouridine synthase A n=5 Tax=Clostridium perfringens RepID=H7CV53_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 494
  • Evalue 5.30e-137
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGAAATATAAAAATTACTTTAGATTATGATGGGAGTAAGTACAAGGGATGGCAAAAGCAAAACCAAAAGGGAAGTAATGTTTCCACAGTTCAAGATAAATTAGAAAAAGTACTAACTAAAATGACTAGTGAAGAGATTCAACTAATTGGTTGTGGAAGAACTGATAGTGGTGTACATGCAAAAAATTATGTAGCAAATTTTAAAACAAATTCTCTTATGACTCTAGAACAAATTATTGAATACATAAATGAATATTTACCTGAAGATATAAGGGTAACGGAAATAAGAGAAGCAAGTGAAAGATTTCATGCTAGATTTAATGTTAAGTCTAAAACTTATGAATATACAATTGATAACAATAAGTTCAAAGATGTATTTTTAAGAAAATATGCATGGCATGTTGAAGAAAAGTTAGACTTAGAAGCTATGGAAGAAGGAGCAAAATATTTATTGGGTACTCATGACTTTAAGAGTTTTACAAGTTTAAAATCAAATAACAAATCAACTTTAAGAACCATAAATAGCATTGAATTTCATGAAAATAATAATATATTAAGTATAAAGATAAATGGAAATGGCTTCTTATTAAATATGGTTAGAATAATAGTAGGAACTTTAGTAGATGTAGGACTTGGAAAAATTGAACCAAAATATATAAATGATATACTTGAAGCGAAGGAAAGAGCAAAAGCTTCAGAGAAAGCACCAGCTCATGGACTTTGTCTTTTAGAATTAAATTATTAA
PROTEIN sequence
Length: 249
MRNIKITLDYDGSKYKGWQKQNQKGSNVSTVQDKLEKVLTKMTSEEIQLIGCGRTDSGVHAKNYVANFKTNSLMTLEQIIEYINEYLPEDIRVTEIREASERFHARFNVKSKTYEYTIDNNKFKDVFLRKYAWHVEEKLDLEAMEEGAKYLLGTHDFKSFTSLKSNNKSTLRTINSIEFHENNNILSIKINGNGFLLNMVRIIVGTLVDVGLGKIEPKYINDILEAKERAKASEKAPAHGLCLLELNY*