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NECEvent2014_4_1_scaffold_160

Alias: 174_001_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_160_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
tal1; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase n=2 Tax=Clostridium butyricum RepID=B1R0W3_CLOBU
NECEvent2014_4_1_scaffold_160_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158..847)
DNA (690bp) protein (230aa)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:KHD16457.1}; EC=5.1.3.4 {ECO:0000313|EMBL:KHD16457.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Class II aldolase/adducin family protein n=2 Tax=Clostridium RepID=A6M1T4_CLOB8 rbh
sgaE; L-ribulose-5-phosphate 4-epimerase
NECEvent2014_4_1_scaffold_160_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1147..2220)
DNA (1074bp) protein (358aa)
Arabinose metabolism transcriptional repressor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMF1_CLOSA rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KHD16456.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
araR; arabinose metabolism transcriptional repressor
NECEvent2014_4_1_scaffold_160_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2593..4062
DNA (1470bp) protein (490aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1492 species="Bacteria; Firm
araA; L-arabinose isomerase AraA (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT5_CLOSA rbh
NECEvent2014_4_1_scaffold_160_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4313..5359
DNA (1047bp) protein (349aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1492 species="Bacteria; Firmicutes; Clostri
UPI0003D5E4E7 related cluster n=2 Tax=unknown RepID=UPI0003D5E4E7 rbh
aldose 1-epimerase
NECEvent2014_4_1_scaffold_160_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5413..6288)
DNA (876bp) protein (292aa)
Hydrolase, Cof family n=2 Tax=Clostridium butyricum RepID=M8JCW7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86029.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cof-like hydrolase
NECEvent2014_4_1_scaffold_160_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6394..7077
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JNB8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86008.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_160_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7182..8270)
DNA (1089bp) protein (363aa)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QZD0_CLOBU rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ86028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
SCP-like extracellular
NECEvent2014_4_1_scaffold_160_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8752..9444
DNA (693bp) protein (231aa)
PHP domain protein n=2 Tax=Clostridium butyricum RepID=B1QZC9_CLOBU rbh
PHP C-domain protein {ECO:0000313|EMBL:EEP52760.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E B
putative metal-dependent phosphoesterase, PHP family
NECEvent2014_4_1_scaffold_160_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9524..11284)
DNA (1761bp) protein (587aa)
recQ1; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGT3_CLOBU rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ETI88310.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA
NECEvent2014_4_1_scaffold_160_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11582..13594)
DNA (2013bp) protein (671aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCW2_CLOBU rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ86053.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
methyl-accepting chemotaxis sensory transducer with cache sensor
NECEvent2014_4_1_scaffold_160_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13849..14481)
DNA (633bp) protein (211aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE1; thiamine-phosphate synthase ThiE (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Clostridium butyricum DKU-01 RepID=M8JNB2_CLOBU rbh
NECEvent2014_4_1_scaffold_160_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14539..15372)
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM23_CLOBU rbh
hydroxyethylthiazole kinase
NECEvent2014_4_1_scaffold_160_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15397..16698)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
thiC; phosphomethylpyrimidine synthase ThiC (EC:4.1.99.17)
Phosphomethylpyrimidine synthase n=2 Tax=Clostridium butyricum RepID=M8K8L0_CLOBU rbh
NECEvent2014_4_1_scaffold_160_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16901..17731)
DNA (831bp) protein (277aa)
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:KJZ86097.1}; EC=2.7.4.7 {ECO:0000313|EMBL:KJZ86097.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium butyricum RepID=M8KGS8_CLOBU rbh
phosphomethylpyrimidine kinase
NECEvent2014_4_1_scaffold_160_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17807..18331)
DNA (525bp) protein (175aa)
ThiW protein n=2 Tax=Clostridium butyricum RepID=R0AUB6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95471.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
thiW protein
NECEvent2014_4_1_scaffold_160_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18730..20055)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=2 Tax=Clostridium butyricum RepID=M8JNA8_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ35621.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
multi antimicrobial extrusion protein MatE rbh
NECEvent2014_4_1_scaffold_160_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20196..21029)
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=M8JM18_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35620.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AraC family transcriptional regulator
NECEvent2014_4_1_scaffold_160_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21241..21336)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASB4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35619.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_160_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21505..21681)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K8K6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35618.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_160_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22229..23431)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JCV2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35617.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
arabinose efflux permease family protein
NECEvent2014_4_1_scaffold_160_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23447..24319)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z6W8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35616.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sugar-specific transcriptional regulator TrmB family protein
NECEvent2014_4_1_scaffold_160_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24482..25036)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z7E1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35615.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_160_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24978..25253)
DNA (276bp) protein (92aa)
Transcription activator, effector binding domain protein n=2 Tax=Clostridium butyricum RepID=M8JMG8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86121.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
NECEvent2014_4_1_scaffold_160_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25376..26911)
DNA (1536bp) protein (512aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K8Z3_CLOBU rbh
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:KJZ86038.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
ABC transporter ATP-binding protein
NECEvent2014_4_1_scaffold_160_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27187..27411
DNA (225bp) protein (75aa)
UPI0003D63876 related cluster n=1 Tax=unknown RepID=UPI0003D63876
Uncharacterized protein {ECO:0000313|EMBL:ETI88288.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_1_scaffold_160_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27417..27962)
DNA (546bp) protein (182aa)
UPI0003D61D50 related cluster n=1 Tax=unknown RepID=UPI0003D61D50 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95461.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_1_scaffold_160_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28081..28536)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDA1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD16429.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RRF2 family protein
NECEvent2014_4_1_scaffold_160_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28688..29749
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNQ4_CLOBU rbh
Oxidoreductase {ECO:0000313|EMBL:KJU71081.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
FAD/FMN-binding oxidoreductase
NECEvent2014_4_1_scaffold_160_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29942..30880
DNA (939bp) protein (313aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=997898 species="Bacteria; Firmicutes; C
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8JMG2_CLOBU rbh
Displaying items 1-30 of 35 in total

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