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NECEvent2014_4_1_scaffold_235

Alias: 174_001_scaffold_235

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_235_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(211..480)
DNA (270bp) protein (90aa)
Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD93_CLOBU
Inhibitor of pro-sigmaK processing BofA {ECO:0000313|EMBL:KJZ88916.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
bofA; sigma-K factor processing regulatory protein BofA
NECEvent2014_4_1_scaffold_235_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(504..782)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY74_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52376.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_1_scaffold_235_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1007..1603)
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
recR; recombination protein RecR
NECEvent2014_4_1_scaffold_235_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1783..2121)
DNA (339bp) protein (113aa)
Nucleoid-associated protein CBDKU1_40060 n=2 Tax=Clostridium butyricum RepID=M8K6N7_CLOBU
Nucleoid-associated protein ClosIBUN13A_CONTIG65g00717 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
DNA-binding protein, YbaB/EbfC family
NECEvent2014_4_1_scaffold_235_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2246..3913)
DNA (1668bp) protein (556aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:KJZ86198.1}; EC=1.2.1.10 {ECO:0000313|EMBL:KJZ86198.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=2 Tax=Clostridium butyricum RepID=M8J2Y9_CLOBU rbh
NECEvent2014_4_1_scaffold_235_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4199..4603
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9V2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88935.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_4_1_scaffold_235_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4715..5506
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; thymidylate synthase ThyA (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBZ0_CLOBU rbh
NECEvent2014_4_1_scaffold_235_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5616..6107
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Clostridium butyricum RepID=M8JYM0_CLOBU rbh
NECEvent2014_4_1_scaffold_235_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6215..7201
DNA (987bp) protein (329aa)
ureidoglycolate lyase (EC:4.3.2.3)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N0_CLOBU rbh
Fumarylacetoacetase {ECO:0000313|EMBL:KHD14899.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_4_1_scaffold_235_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7931..8728)
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8J2Y1_CLOBU rbh
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:KJZ88898.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
glnH1; glutamine-binding periplasmic protein GlnH
NECEvent2014_4_1_scaffold_235_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8978..9751)
DNA (774bp) protein (258aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD82_CLOBU rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD14901.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
glnQ1; glutamine transport ATP-binding protein GlnQ
NECEvent2014_4_1_scaffold_235_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9732..10397)
DNA (666bp) protein (222aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBY6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88924.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnP1; glutamine transport system permease protein GlnP
NECEvent2014_4_1_scaffold_235_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10466..11263)
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JYL5_CLOBU rbh
Glutamine ABC transporter, periplasmic glutamine-binding protein / Glutamine transport system permease protein GlnP {ECO:0000313|EMBL:KJZ88891.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostrid
extracellular solute-binding protein
NECEvent2014_4_1_scaffold_235_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11345..12343)
DNA (999bp) protein (333aa)
ansA; L-asparaginase 1 (EC:3.5.1.1)
L-asparaginase n=3 Tax=Clostridium butyricum RepID=B1QY64_CLOBU rbh
L-asparaginase, type I {ECO:0000313|EMBL:ENZ29526.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_235_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12353..13006)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPY8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29525.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
NECEvent2014_4_1_scaffold_235_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13242..14363)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9U3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29524.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methanol dehydrogenase
NECEvent2014_4_1_scaffold_235_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14384..15721)
DNA (1338bp) protein (446aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KJZ95136.1}; EC=2.6.1.62 {ECO:0000313|EMBL:KJZ95136.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridi
Adenosylmethionine--8-amino-7-oxononanoate transaminase n=2 Tax=Clostridium butyricum RepID=M8JBY2_CLOBU rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
NECEvent2014_4_1_scaffold_235_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16036..16749)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABJ1_CLOBU rbh
Arginine/ornithine antiporter ArcD {ECO:0000313|EMBL:KJZ88899.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
Sulfite exporter TauE/SafE.
NECEvent2014_4_1_scaffold_235_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17035..17187)
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY59_CLOBU
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:KJZ86222.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
hypothetical protein
NECEvent2014_4_1_scaffold_235_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17387..17977
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPY4_CLOBU rbh
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:KJZ88930.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
BioY protein
NECEvent2014_4_1_scaffold_235_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17993..18679
DNA (687bp) protein (229aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
bioD; dithiobiotin synthetase (EC:6.3.3.3)
UPI0003D67E29 related cluster n=1 Tax=unknown RepID=UPI0003D67E29 rbh
NECEvent2014_4_1_scaffold_235_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18682..20031
DNA (1350bp) protein (450aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9ZZ23_CLOBU rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Displaying 22 items

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