ggKbase home page

NECEvent2014_4_1_scaffold_241_14

Organism: NECEvent2014_4_1_Propionibacterium_63_26

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 ASCG 14 / 38
Location: 12587..13195

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_ UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 424
  • Evalue 7.70e-116
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CW09_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 424
  • Evalue 5.50e-116
  • rbh
putative isopentenyl-diphosphate delta-isomerase similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 191.0
  • Bit_score: 391
  • Evalue 1.50e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGTCATCACGATGGCGAGGACGGGGGCACGCCTGCCCATGACGCGGATTCTGTCCACGACGATCTCGTCATCCTGCTCGACGACGACGGCAACCAGATTGGGACCGCTCCCCGAGCGACCGTTCACAGCCAGCACACCCCACGACATCTGGCCTTTTCCTGCCATGTCCTTGACGTCGGCGGGCGAGTTCTGCTGACCCGACGAGCCCTGACGAAGGTGGCCTGGCCGGGGGTGTGGACGAACACCTGTTGTGGGCATCCGCGGATCGGCGAAACGATCATCGACGCGGCGGTGCGTCGCACTCACCAGGAGCTCGGTCTCGACCTCGATCCGCGTCGGATGGGCGTCGTCCTTCCTGGTTTTTCCTATCGTGCCACCGACGCTGGCGGCATCGTCGAGGACGAGCTGTGCCCGGTCGTCGTTGCTCGGTTGTCCCTTCCCGAGGAACTCGTCGAGCTGAATCCTGACCCGGAGGAGGTCGAAGAGGTCACCTGGGTGGGCTGGCAGGACATGTACGGCCTGGCGCGATCGATGCCGACCCTGCTGAGCCCCTGGGCGGTCGAGCAGATGCTCGAGTTCGGTCCGGAACTGCCCGTCGTGCGCTGA
PROTEIN sequence
Length: 203
MSHHDGEDGGTPAHDADSVHDDLVILLDDDGNQIGTAPRATVHSQHTPRHLAFSCHVLDVGGRVLLTRRALTKVAWPGVWTNTCCGHPRIGETIIDAAVRRTHQELGLDLDPRRMGVVLPGFSYRATDAGGIVEDELCPVVVARLSLPEELVELNPDPEEVEEVTWVGWQDMYGLARSMPTLLSPWAVEQMLEFGPELPVVR*