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NECEvent2014_4_1_scaffold_529_5

Organism: NECEvent2014_4_1_Staphylococcus_epidermidis_32_27

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38 MC: 2
Location: comp(2987..3550)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 354
  • Evalue 2.40e-95
RNA methyltransferase, RsmD family n=21 Tax=Staphylococcus epidermidis RepID=C5QWB2_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 370
  • Evalue 8.80e-100
  • rbh
Putative rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:ETJ08354.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22. UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 9.40e-100

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Taxonomy

Staphylococcus sp. DORA_6_22 → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
ATGAAATGGAAGTGTGAGTCAATGCGTGTAATTGCGGGTAAGCATAAAAGTAAAGCGCTAGAAAGTTTAGAGGGGCGAAATACTCGTCCAACTATGGATAAAGTTAAAGAAGGTATTTTTAATAGTTTATATGATGTTTCTGGTTTAGGATTAGACTTATTTGCCGGTAGTGGTGCACTTGGCATTGAAGCATTATCCCGTGGTATGGATAAAATGATTTTTGTAGATCAAAATTTTAAAGCGGTCAAGGTTATAAAAGCTAATCTTAATCAATTAGATTTAATGTCACAAGCTGAAGTCTATAAAAATAATGCTGACAGAGCACTTAAAGCACTTGCTAAACGAGAAATACAATTCGATGTTATCTTTTTAGACCCACCTTATAATAAAGGGCTTATAAATGAGGCGATTTCTCGTATAGCAGAGTTTAACTTATTAAAAGAAAATGGTATTATCGTTTGTGAGTTTAGTCATAATGAAGAAATAACAATTGCGCCATTTCAAATGATTAAGCGTTATCATTATGGTTTGACAGATACTTTGTTACTTGAAAAAGGAGAATAA
PROTEIN sequence
Length: 188
MKWKCESMRVIAGKHKSKALESLEGRNTRPTMDKVKEGIFNSLYDVSGLGLDLFAGSGALGIEALSRGMDKMIFVDQNFKAVKVIKANLNQLDLMSQAEVYKNNADRALKALAKREIQFDVIFLDPPYNKGLINEAISRIAEFNLLKENGIIVCEFSHNEEITIAPFQMIKRYHYGLTDTLLLEKGE*