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NECEvent2014_4_1_scaffold_1171_1

Organism: NECEvent2014_4_1_Staphylococcus_epidermidis_32_27

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38 MC: 2
Location: 1..1383

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1344987 species="Bacteria; F UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 461.0
  • Bit_score: 908
  • Evalue 4.00e-261
transcription-repair coupling factor n=1 Tax=Staphylococcus epidermidis RepID=UPI000365E6FA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 461.0
  • Bit_score: 908
  • Evalue 2.90e-261
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 461.0
  • Bit_score: 908
  • Evalue 8.10e-262

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1383
GTTCCAGTTGATCAAATGGATCAAGTTCAAAAGTATGTGGCTTCTGAAGATAAGTCGCCTAGATTAAATAAATTAGGCGGGACAGAATGGAAAAAAACAAAGGCGAAAGTTCAACAAAGTGTTGAAGATATAGCTGATGAATTAATTGATTTGTATAAAGAACGTGAAATGTCTGTAGGTTATCAATACGGCCAAGATACTGCAGAGCAATCAGCATTTGAGCATGATTTTCCATATGAATTAACACCCGATCAAAGTAAGTCAATCGATGAAATTAAAGGTGACATGGAAAGAGCAAGACCTATGGACCGTCTTCTTTGTGGTGATGTGGGATATGGTAAAACTGAAGTGGCTGTCCGTGCAGCGTTTAAAGCTGTCATGGATGGTAAGCAAGTTGCGTTTTTAGTACCAACAACGATTCTTGCACAACAACACTACGAAACACTACTTGAACGTATGCAAGATTTTCCGGTCGAAATTCAATTGGTAAGTCGATTCCGCACAGCTAAAGAAATAAGGGAAACTAAAGAAGGGCTCAAATCAGGATATGTTGACATTGTCGTAGGTACACATAAATTATTAGGTAAAGATATTCAATATAAAGATTTGGGATTGCTTATTGTTGATGAAGAACAACGTTTTGGAGTGCGACATAAAGAACGCATTAAAACTTTGAAAAAAAACGTTGATGTACTGACGCTTACTGCAACACCAATACCAAGAACATTGCATATGAGTATGTTAGGTGTACGTGACTTATCAGTGATTGAAACACCACCTGAAAATCGTTTTCCTGTACAAACTTATGTCTTAGAACAGAATACGAACTTTATTAAAGAGGCATTAGAGCGTGAATTATCTCGCGATGGACAAGTATTTTATTTGTATAACAAAGTGCAGTCCATTTATGAAAAAAGAGAACAACTTCAAATGTTAATGCCTGACGCTAACATTGCTGTAGCACATGGCCAAATGACTGAACGTGATTTAGAGGAAACAATGTTAAGCTTTATTAATCACGAGTACGATATTTTAGTAACGACTACAATTATTGAAACAGGTGTAGATGTACCAAATGCTAATACTTTAATCATAGAAGAGGCTGATCGTTTTGGTTTAAGCCAGCTATACCAATTAAGAGGACGTGTAGGACGTTCAAGTAGAATTGGTTACGCTTATTTCTTACATCCAGCTAACAAAGTGTTAAATGAGACTGCTGAAGAGCGATTGCAAGCTATTAAGGAGTTTACCGAACTAGGTTCAGGTTTTAAAATCGCTATGCGAGATTTAAATATTCGTGGTGCAGGCAATTTACTCGGTAAGCAACAACATGGCTTTATTGATTCGGTTGGTTTCGATTTATACTCTCAAATGTTAGAAGAA
PROTEIN sequence
Length: 461
VPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEE