ggKbase home page

NECEvent2014_4_1_scaffold_1579_1

Organism: NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

partial RP 10 / 55 MC: 2 BSCG 6 / 51 ASCG 5 / 38
Location: 3..269

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosomal RNA large subunit methyltransferase J n=1 Tax=Propionibacterium acnes HL050PA1 RepID=E4G4U5_PROAA similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 176
  • Evalue 8.80e-42
Putative hemolysin {ECO:0000313|EMBL:ACH56446.1}; Flags: Fragment;; TaxID=1747 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacter UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 176
  • Evalue 1.20e-41
putative cytotoxin/hemolysin similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 176
  • Evalue 2.50e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium acnes → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ACGATGATCCTTGAACCCATGTCAGCTGTTGTCAGCCCAGACGGCCTCATGCTGCTGCTGGTGAAGCCTCAATTTGAGGTTGGTCGCAAGGCTTTGGGAGCCCATGGCGTTGTCACGGACCCGGCCCTGCGCTTGCAGGCCATCGCGGGTGTCATGGCAGCAGCGGCAGATCTGGGTTGGCGTATGCGTGACGAGTGCGATAGCCCGTTGCCCGGGCAGGATGGAAACGTTGAGCACTTCGTCTTGCTGGAACGTACGGGTCGGTGA
PROTEIN sequence
Length: 89
TMILEPMSAVVSPDGLMLLLVKPQFEVGRKALGAHGVVTDPALRLQAIAGVMAAAADLGWRMRDECDSPLPGQDGNVEHFVLLERTGR*