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NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

NECEvent2014_4_1_Propionibacterium_acnes_59_5
In projects: NECEvent2014_4_1

Consensus taxonomy: Propionibacterium acnes  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1-50 of 666 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_1_scaffold_491 174_001_scaffold_491
Species: Propionibacterium avidum (75%)
4 4082 bp 63.99 17.64 89.15
NECEvent2014_4_1_scaffold_791 174_001_scaffold_791
Species: Propionibacterium sp. KPL1838 (50%)
2 2048 bp 61.13 17.36 93.31
NECEvent2014_4_1_scaffold_1299 174_001_scaffold_1299
Species: CG_Propioni_01 (100%)
1 1262 bp 57.21 11.17 88.19
NECEvent2014_4_1_scaffold_1249 174_001_scaffold_1249
Species: Propionibacterium acnes (66.67%)
3 1306 bp 62.17 8.84 66.39
NECEvent2014_4_1_scaffold_1548 174_001_scaffold_1548
Species: Propionibacterium acnes (50%)
2 1092 bp 51.47 8.65 93.68
NECEvent2014_4_1_scaffold_639 174_001_scaffold_639
Species: Corynebacterium sp. KPL1821 (50%)
2 2546 bp 56.56 8.37 92.14
NECEvent2014_4_1_scaffold_1510 174_001_scaffold_1510
Species: Propionibacterium acnes (100%)
1 1116 bp 60.04 8.33 59.41
NECEvent2014_4_1_scaffold_630 174_001_scaffold_630
Species: Propionibacterium acnes (100%)
4 2626 bp 50.76 7.71 79.40
NECEvent2014_4_1_scaffold_1319 174_001_scaffold_1319
Species: Propionibacterium acnes (100%)
2 1249 bp 58.13 7.69 100.16
NECEvent2014_4_1_scaffold_1413 174_001_scaffold_1413
Species: Propionibacterium acnes (100%)
3 1176 bp 57.57 7.65 84.44
NECEvent2014_4_1_scaffold_1202 174_001_scaffold_1202
Species: Propionibacterium acnes (100%)
1 1352 bp 55.33 7.54 79.44
NECEvent2014_4_1_scaffold_1699 174_001_scaffold_1699
Species: Propionibacterium acnes (100%)
3 1009 bp 61.15 7.43 104.36
NECEvent2014_4_1_scaffold_1677 174_001_scaffold_1677
Species: Propionibacterium acnes (100%)
1 1022 bp 61.74 7.34 99.80
NECEvent2014_4_1_scaffold_1663 174_001_scaffold_1663
Species: Propionibacterium acnes (100%)
1 1028 bp 65.08 7.30 99.81
NECEvent2014_4_1_scaffold_805 174_001_scaffold_805
Species: Corynebacterium pseudogenitalium (66.67%)
3 2013 bp 58.52 7.30 91.65
NECEvent2014_4_1_scaffold_957 174_001_scaffold_957 3 1648 bp 54.00 7.28 86.23
NECEvent2014_4_1_scaffold_1193 174_001_scaffold_1193
Species: CG_Propioni_01 (50%)
2 1365 bp 61.03 7.25 73.63
NECEvent2014_4_1_scaffold_1569 174_001_scaffold_1569
Species: Propionibacterium acnes (50%)
2 1081 bp 57.35 7.22 89.92
NECEvent2014_4_1_scaffold_1623 174_001_scaffold_1623
Species: Propionibacterium acnes (100%)
1 1047 bp 58.17 7.16 99.71
NECEvent2014_4_1_scaffold_1177 174_001_scaffold_1177
Species: Propionibacterium acnes (100%)
2 1382 bp 60.93 7.16 80.32
NECEvent2014_4_1_scaffold_1344 174_001_scaffold_1344
Species: Propionibacterium acnes (50%)
2 1233 bp 58.88 7.06 91.00
NECEvent2014_4_1_scaffold_1528 174_001_scaffold_1528
Species: CG_Propioni_01 (50%)
2 1107 bp 54.29 7.05 100.00
NECEvent2014_4_1_scaffold_1095 174_001_scaffold_1095
Species: Propionibacterium sp. KPL2008 (50%)
2 1461 bp 58.32 6.98 70.43
NECEvent2014_4_1_scaffold_1434 174_001_scaffold_1434
Species: Propionibacterium sp. KPL1847 (50%)
2 1164 bp 51.89 6.96 81.44
NECEvent2014_4_1_scaffold_1648 174_001_scaffold_1648
Species: Propionibacterium acnes (75%)
4 1038 bp 55.01 6.94 75.14
NECEvent2014_4_1_scaffold_1206 174_001_scaffold_1206
Species: Propionibacterium acnes (100%)
1 1347 bp 54.34 6.90 64.14
NECEvent2014_4_1_scaffold_1131 174_001_scaffold_1131
Species: Propionibacterium acnes (100%)
1 1420 bp 58.73 6.87 72.68
NECEvent2014_4_1_scaffold_1446 174_001_scaffold_1446
Species: Propionibacterium acnes (100%)
2 1157 bp 60.59 6.87 83.75
NECEvent2014_4_1_scaffold_741 174_001_scaffold_741
Species: Propionibacterium sp. KPL1847 (66.67%)
3 2142 bp 54.34 6.86 46.36
NECEvent2014_4_1_scaffold_1658 174_001_scaffold_1658
Species: Propionibacterium acnes (100%)
4 1032 bp 58.82 6.83 98.55
NECEvent2014_4_1_scaffold_1470 174_001_scaffold_1470
Species: Propionibacterium acnes (100%)
2 1145 bp 56.86 6.81 95.90
NECEvent2014_4_1_scaffold_1340 174_001_scaffold_1340
Species: CG_Propioni_01 (50%)
2 1235 bp 62.02 6.80 99.11
NECEvent2014_4_1_scaffold_1039 174_001_scaffold_1039
Species: Propionibacterium acnes (100%)
1 1529 bp 58.73 6.77 99.87
NECEvent2014_4_1_scaffold_1514 174_001_scaffold_1514
Species: Propionibacterium acnes (100%)
2 1112 bp 59.71 6.74 95.77
NECEvent2014_4_1_scaffold_1014 174_001_scaffold_1014
Species: Propionibacterium acnes (100%)
3 1557 bp 57.80 6.74 78.61
NECEvent2014_4_1_scaffold_593 174_001_scaffold_593
Species: Propionibacterium acnes (100%)
4 2835 bp 55.59 6.67 93.65
NECEvent2014_4_1_scaffold_594 174_001_scaffold_594
Species: Propionibacterium acnes (100%)
3 2835 bp 57.18 6.67 95.98
NECEvent2014_4_1_scaffold_1002 174_001_scaffold_1002
Species: CG_Propioni_01 (50%)
2 1575 bp 53.46 6.67 99.62
NECEvent2014_4_1_scaffold_1574 174_001_scaffold_1574
Species: Propionibacterium acnes (50%)
2 1079 bp 57.83 6.67 73.12
NECEvent2014_4_1_scaffold_1152 174_001_scaffold_1152
Species: Propionibacterium acnes (100%)
3 1398 bp 54.72 6.65 71.46
NECEvent2014_4_1_scaffold_666 174_001_scaffold_666
Species: Propionibacterium acnes (100%)
3 2400 bp 59.21 6.63 86.75
NECEvent2014_4_1_scaffold_605 174_001_scaffold_605
Species: Propionibacterium acnes (100%)
3 2763 bp 55.66 6.62 95.22
NECEvent2014_4_1_scaffold_1144 174_001_scaffold_1144
Species: Propionibacterium acnes (100%)
1 1405 bp 59.00 6.62 99.29
NECEvent2014_4_1_scaffold_1481 174_001_scaffold_1481
Species: Propionibacterium acnes (50%)
2 1137 bp 54.18 6.60 97.89
NECEvent2014_4_1_scaffold_1662 174_001_scaffold_1662
Species: Propionibacterium acnes (50%)
2 1029 bp 59.09 6.56 104.67
NECEvent2014_4_1_scaffold_779 174_001_scaffold_779
Species: CG_Propioni_01 (66.67%)
3 2060 bp 57.82 6.55 96.26
NECEvent2014_4_1_scaffold_1053 174_001_scaffold_1053
Species: Propionibacterium acnes (100%)
2 1513 bp 62.72 6.54 100.13
NECEvent2014_4_1_scaffold_719 174_001_scaffold_719
Species: CG_Propioni_01 (50%)
2 2208 bp 59.56 6.52 99.18
NECEvent2014_4_1_scaffold_627 174_001_scaffold_627
Species: Propionibacterium acnes (100%)
3 2632 bp 58.51 6.50 89.48
NECEvent2014_4_1_scaffold_1173 174_001_scaffold_1173
Species: Propionibacterium acnes (100%)
3 1385 bp 61.01 6.50 89.24
Displaying items 1-50 of 666 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.