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NECEvent2014_4_3_Actinomyces_59_538_scaffold_4_282

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 320999..324904

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 999.99
  • Bit_score: 2278
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Actinomyces sp. ph3 RepID=UPI000302A139 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 999.99
  • Bit_score: 2277
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 999.99
  • Bit_score: 1812
  • Evalue 0.0

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Taxonomy

Actinomyces sp. S6-Spd3 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3906
TTGATCGACGCTAAGACGTTCGACAGCCTCAAGATCACCCTGGCAACGACAGATGACATCTCAGGATGGTCCCACGGCGAGGTAAAAAAGCCCGAAACGATTAACTACCGCACCCTCAAGCCTGAGCGCGACGGCTTGTTCGGTGAACAGATTTTTGGTCCGACCCGCGACTGGGAATGTGCGTGTGGCAAGTACAAGCGCGTGCGCTACAAGGGCATCGTGTGTGAAAAGTGTGGCGTCGAAGTCACACGCTCGAAGGTGCGTCGCGAGCGCATGGGTCATATCGACCTGGCAGCGCCTGTCACGCACATCTGGTACTTCAAAGGCGTGCCCTCACGCCTCGGATACGTCCTGGACCTGGCTCCGAAGGACCTCGAAAAGGTTATCTACTTCGCTGCCTACATGATCACCGAGGTTGACGAAAAGGGTCGCGACGAGGACCTTGCCGACCTGCGCAGCGAGCTCGAAGTTGAAAAGGGCCACCTGGAGTCCCAGCGTGACGACGCGATCAACCAGCGCGCCGAAAAGCTGGAGCAGACCCTGGCACAGATGGAAGCCGATGGCGCCAAAGCTGCCGATCGCGACCGTGAACGCAAGGCAGGGGAACGCGAAATGGGGCAGATTCGCCGCCGTTTCGACCGCGACCTGGAACAGCTGGAGACCGTGTGGGAGCGTTTCCGCGACCTCAAGGTTGGTGACCTGGAAGGTGACGAGCGCCTGTACCGCGCCATGCAGCTGCGTTACGGCACGTACTTCAAGGGCGATATGGGTGCAGCCGCCATTCAGAAGCGTCTGCAGACCTTCGACCTGGATGCCGAAGTGGAGAACCTGCGCAACACGATCGCCAACGAGTCGGGCCCGCGCAAGACCCGTGCGATCAAGCGCCTGAAGGTCGTCAACGCCTTTGTGCAAACCGGTAACAAGCCGGAGTCGATGGTGCTGACCGCTATCCCCGTCATCCCGCCGGATCTGCGCCCGATGGTTCAGCTGGACGGTGGCCGCTTTGCGACCTCGGACCTGAACGATCTGTACCGTCGCGTCATCAACCGTAACACGCGCCTGAAGAGGCTGCTGGAGCTGGGTGCGCCCGAGATCATTGTCAACAACGAAAAGCGCATGCTGCAGGAGTCTGTGGACGCGCTGTTCGACAACGGCCGTCGTGGCCGCCCCGTGGCCGGTCCTGGTAACCGCCCGCTGAAGTCGATCTCTGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAAAACCTGCTCGGTAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCGTGGTGGGCCCGCAGCTGAAACTGCACCAGTGCGGTCTGCCCAAGCAGATGGCTCTGGAGCTGTTCAAGCCATTCGTGATGAAGCGCCTGGTTGAGAAGTCGTTCGCGCAGAACGTCAAGGCAGCCAAGCGTAAGGTTGAGCGCCAGCGCCCCGAGGTGTGGGACGTCCTCGACGACGTTATTCGTGAGCACCCGGTGCTGCTGAACCGCGCACCTACACTGCACCGCTTGGGCATTCAGGCCTTCGAACCGCAGCTGATTGAAGGTAAAGCTATTCAGCTGCACCCGCTGGCCTGTGGCGCGTTCAACGCTGACTTTGACGGTGACCAGATGGCAGTCCACCTCCCGCTGGGTGCTGAGGCTCAGGCTGAGGCACGCATCCTGATGTTGTCGACGAACAACATCCTCAAGCCTTCCGACGGTCGCCCTGTTGCAATGCCGTCGCAGGACATGATCATTGGTCTGTTCCACCTGACCAGTGATCCTGATCCGGCTGTTGAGGTGGCGACTGATGAAAACGGTGAGCCGGTTGTGCCGTGCTATTCGTCAGTGGCTGAGGCACGTATGGCGTTTGATCGTGGCGAACTGGATCTGAATGCCCGTGCACGGATCCGCTTCACCGACATTGTGCCGCCCAAGGGCTGGGAAGTCCCGGAGAACTGGGAAGAGGGCGATCCGATCCTGCTGGAAACCTCGCTGGGGCGCGCGATCTTCAACGAGACTCTGCCGGTCGACTACCCGTTCGTCAACTACGTTGTGGGTAAGAAGCAGCTGGGAACGATCGTTAACACATTGACGGAGCGTTACCCGAACGTCCTCGTCGCCGAATCTCTGGACGCACTGAAAGCTGCCGGTTTCCACTGGTCAACTTGGTCTGGCATCACAATCGCGTTCTCTGACATTCAAGCGTCAGACCGCAAGGAAGAAATCCTGGCGCGTTACGAAGCCAAAGCTGCGGAGATTCAGGACCAGTTCGACACCGGTATCATCCTGGAAGAAACCCGGTACGAGGAACTGGTCAAGCTGTGGCTGAAGTGCACTGAGGAAGTTGCTGACGACATGCGTCAGAACTTCGATGCGCGCAACACCGTCTACCGCATGGTGTCGTCGGGTGCTCGTGGTAACTGGAGCCAGGTCCAGCAGATCGCCGGTATGCGTGGCCTGGTGTCTGACCCGAAGCAGAAGCTCATTGAGCGTCCGATTAAGGCAAACTACCGTGAAGGCCTGACGGTTCTGGAGTACTTCATCGCAACTCACGGCGCTCGTAAGGGTCTGGCTGATACCGCTCTTCGTACCGCCGAATCTGGTTACCTGACCCGCCGTCTGGTCGACGTGTCGCAGGACGTGATTGTGCGTGAAGAGGACTGCGGTACCCGCGCCGGCATTCGCGTGCCGATCGCCCGCAAGAACGAGTTTGACGAGTGGGAAGCCGTTGAAGCGGTTGAGACTACTGCGTACGCCCGTACGCTTGCCCGCGATGCGGTGGGTGAAGATGGCACTGTCGTGGCGGAGGCTGGCACCGACATTGGTGATGACCTGATTGCTCAGATGGTTGCCGCCGGTGTGACCGAGGTGACGACCCGTTCCGTGCTGACCTGTGAGTCGGCGGTGGGCGTGTGCGCCAGCTGCTACGGCCGTTCGCTGGCCACCGGTAAGCGCGTCTCGATCGGTGAAGCTGTCGGTATTATCGCAGCTCAGTCGATTGGTGAGCCTGGTACCCAGCTGACGATGCGTACGTTCCACACCGGTGGTGCTGCGTCGGCTGCTGACATTACCCAGGGTCTGCCGCGTGTTCAGGAGCTCTTCGAGGCGCGCAGCCCGAAGATTGAAGCCAAGATGAACGAGGCCGCCGGTCGCGTCCATATTGACGACGAAGATCCCGGTTCACGCAAGATCGTGATCACTCGCGATGATGGCCGTGAGGATTCAATCATCGAGGTGACTCGTCGCCAGAAACTCCTGGTGAACGAGGGCGACCACATCGAAGCTGGAACCCCGTTGACTGAAGGCCAGTTGGATCCCAAGGAGGTCCTGCGTATTATGGGCCGCAATGTGGCTCAGAAGCAGCTGGTTGATGAGGTGCAGAAGGTCTACCGCGATCAGGGTGTGGGTATTCACGCCAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCAAGATCACTATTCTGGAGCCGGGCGACACCTCGTTCATGCCGGGTCAGCTGGTGGATCGTTCAGCGTACTTGTCGGCCAACCGTCGAGTTGCCGCCGAGGGCGGTCAGCCCGCGTCAGGTCGCCAGATGCTGATGGGTATCACCAAGGCGTCGTTGGCAACGGATTCGTGGCTGTCGGCTGCGTCCTTCCAGGAGACCACAAAGGTCCTGACCGAAGCCGCCATGAACGGCAAGGTTGATCACCTGGTGGGTCTGAAGGAGAACGTCATCCTCGGAAAGTTGATCCCGGCCGGCACCGGCCTGGCTCGCTACAACCAGGTTGTCGTGGAGCCCACTGCTGAGGCAATGGCCGATGCGAACTATTCCGAACTGGATTTCCAGGATGGAGAAGTTCCTGAGTCCTTCCTGGCCTCGCTCGACTCGATCGATTTCGGAATTCCGTTCCACGGCCAGAACTGA
PROTEIN sequence
Length: 1302
LIDAKTFDSLKITLATTDDISGWSHGEVKKPETINYRTLKPERDGLFGEQIFGPTRDWECACGKYKRVRYKGIVCEKCGVEVTRSKVRRERMGHIDLAAPVTHIWYFKGVPSRLGYVLDLAPKDLEKVIYFAAYMITEVDEKGRDEDLADLRSELEVEKGHLESQRDDAINQRAEKLEQTLAQMEADGAKAADRDRERKAGEREMGQIRRRFDRDLEQLETVWERFRDLKVGDLEGDERLYRAMQLRYGTYFKGDMGAAAIQKRLQTFDLDAEVENLRNTIANESGPRKTRAIKRLKVVNAFVQTGNKPESMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNTRLKRLLELGAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVEKSFAQNVKAAKRKVERQRPEVWDVLDDVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLACGAFNADFDGDQMAVHLPLGAEAQAEARILMLSTNNILKPSDGRPVAMPSQDMIIGLFHLTSDPDPAVEVATDENGEPVVPCYSSVAEARMAFDRGELDLNARARIRFTDIVPPKGWEVPENWEEGDPILLETSLGRAIFNETLPVDYPFVNYVVGKKQLGTIVNTLTERYPNVLVAESLDALKAAGFHWSTWSGITIAFSDIQASDRKEEILARYEAKAAEIQDQFDTGIILEETRYEELVKLWLKCTEEVADDMRQNFDARNTVYRMVSSGARGNWSQVQQIAGMRGLVSDPKQKLIERPIKANYREGLTVLEYFIATHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTRAGIRVPIARKNEFDEWEAVEAVETTAYARTLARDAVGEDGTVVAEAGTDIGDDLIAQMVAAGVTEVTTRSVLTCESAVGVCASCYGRSLATGKRVSIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASAADITQGLPRVQELFEARSPKIEAKMNEAAGRVHIDDEDPGSRKIVITRDDGREDSIIEVTRRQKLLVNEGDHIEAGTPLTEGQLDPKEVLRIMGRNVAQKQLVDEVQKVYRDQGVGIHAKHIEVIVRQMLRKITILEPGDTSFMPGQLVDRSAYLSANRRVAAEGGQPASGRQMLMGITKASLATDSWLSAASFQETTKVLTEAAMNGKVDHLVGLKENVILGKLIPAGTGLARYNQVVVEPTAEAMADANYSELDFQDGEVPESFLASLDSIDFGIPFHGQN*