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NECEvent2014_4_3_Actinomyces_59_538_scaffold_7_19

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 22804..23598

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D64443 related cluster n=1 Tax=unknown RepID=UPI0003D64443 similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 253.0
  • Bit_score: 248
  • Evalue 7.10e-63
DeoR family transcriptional regulator {ECO:0000313|EMBL:ETI82794.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense D similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 253.0
  • Bit_score: 248
  • Evalue 9.90e-63
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 264.0
  • Bit_score: 206
  • Evalue 1.10e-50

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGTTGGCTTATCAGCGTCGTGCCAGAATCCTTGACTTGGTACATGACCGCGGCAGTATGTCAGTATCCGATCTGGCACAGCACTTCGGCACCTCCGAGTCAACGATTCGGCGCGACCTGAACCGTCTGGATGAGCAAGGCGCACTGACGCGCGTGCGCGGCGGCGGAATTCACGGCGGTGTACCCAGCTTTAAAACCCTGAGCGAATCCCCGCACGATACACAGGACCAGCCTTTTGCCACGGTTGCTATGCGATCAGCCGAAGAAAAGGACCGTATCGGCAGGTCAGCTGCAGCCCTCGTACCCGATCAGTCGGTCGTCCTCATCGACATCGGCACCACCGGCGTGATGGTGGCCCGCAATCTCAGGCATCGCGACGTGACTGTTGTCACTGCCTCCCTGGCTGTCGCAGACGAACTGCGAGGCGAATGTGAAGCCACGCTTGTCGTACTGGGTGGCGTATTGCGAACAAACTACCTGTCACTGGTCGGCAGCCTCACTGAACATGCACTGGAGGCAATCAGAGCTGACATCGCATTCGTTGGCACCTCGGGTATCCGCCATTCCGGCGCTTTGATGGATTCGACCGGAATGGAAGTGCCCATCAAGAAATCAATCATCGCGCATTCTGAACAAACCTTCGCCGTCGCGTCATCGGACAAGTTTCCGGGATCAGGCCTGCTGACCGTGTGCCATCTCAGTGACTTGACGGGTGTTGTGACGACCGCCGAAATATCCACCACCCCCTCACTGGCAGAGCTTGAGGGAACAAACACGAAAGTGATCAGCGCATGA
PROTEIN sequence
Length: 265
MLAYQRRARILDLVHDRGSMSVSDLAQHFGTSESTIRRDLNRLDEQGALTRVRGGGIHGGVPSFKTLSESPHDTQDQPFATVAMRSAEEKDRIGRSAAALVPDQSVVLIDIGTTGVMVARNLRHRDVTVVTASLAVADELRGECEATLVVLGGVLRTNYLSLVGSLTEHALEAIRADIAFVGTSGIRHSGALMDSTGMEVPIKKSIIAHSEQTFAVASSDKFPGSGLLTVCHLSDLTGVVTTAEISTTPSLAELEGTNTKVISA*