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NECEvent2014_4_3_Actinomyces_59_538_scaffold_13_35

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 38828..39037

Top 3 Functional Annotations

Value Algorithm Source
Cro/Cl family transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B318AA similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.30e-24
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFM46369.1}; TaxID=871571 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris ATCC 35 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 116
  • Evalue 2.00e-23
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 66.0
  • Bit_score: 102
  • Evalue 6.00e-20

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Taxonomy

Mobiluncus mulieris → Mobiluncus → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGCGAACACAGATCCCGAAACTACGCAAAGAACGCAAGCTTTCACAGGAAGACCTTGCTCGGGCAGTCGGCGTCACACGGCAAACAATCACCTCAATTGAAACCGGTAAATACGTGGCGTCCCTGCCGCTGGCATACAAAATCGCCCACTACTTCGGCCTCACAATCGAGAACGTTTTCGACTTCACAGACCTGGAGAAAACAACATGA
PROTEIN sequence
Length: 70
MRTQIPKLRKERKLSQEDLARAVGVTRQTITSIETGKYVASLPLAYKIAHYFGLTIENVFDFTDLEKTT*