ggKbase home page

NECEvent2014_4_3_Actinomyces_59_538_scaffold_18_21

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(20782..22818)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B2FFCA similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 686.0
  • Bit_score: 826
  • Evalue 1.60e-236
  • rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:EJN52568.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 667.0
  • Bit_score: 818
  • Evalue 8.10e-234
  • rbh
DNA helicase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 617.0
  • Bit_score: 631
  • Evalue 2.80e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2037
GTGCCTTCACAAGATTCTGCCCCTATGTCCACATCCGATGCCCTCGGCCTCGATGACGTTCTGTTTCACGAGGACGACGTTGCACAGGATTCGGATGCTGACAGCGAGGCCCTCGCCGATGGAACTGACGACAATGACCATGCCGACGATGTCGATCAGGACGACATCGACCTCGAAGATGACGAGGATTACGATGGAAATGACGACGAGGATGACGACGCCGACGATCAGGTGAACTTCGCTGACCTCGGTCTGCCCGCTCCCCTGCTGGACACGGTCACAGCGATGGGATTCGAGACGCCCACGCCCATTCAGGCTGAGGCGATTCCCGCACTGCTTGAGGCGCGTGACGTGGTCGGCATCGCGCAGACCGGCACCGGTAAGACGGCGGCATTCGGGCTGCCGATGCTGACGCTGATTGATCCGAAAGAAAAGGATGTCCAGGCGGTCGTTCTGGCTCCGACGCGCGAACTGGCGCTGCAGTCAGCCGATGCGATGGAAGAGTTTGCGGCGAGCTACCGTGGCATCAACATTGTCGCCGTCTATGGTGGCTCTGCATACGGCCCGCAGCTTCGCGCGCTGAAGGATGGCGCGCAGATCGTCGTGGGCACACCTGGCCGCATGATCGACCTGATCGAGAAGGGCGCGCTGGATCTGTCCTCGGTGCGTATGCTCGTCCTTGATGAAGCCGATGAAATGCTGCGCATGGGATTCGCCGAGGATGTGGAGACCATCGCCGCCACAGTTCCCACCCAACGCGTCACGGCACTCTTTTCGGCCACAATGCCGGCAGCGATTGAAAAAGTGGCGCAAACCCACTTGCATGATCCGTTGAAGATAGCGGTGTCGGAAGAGTCGTCGACCGTTGACACCATCCACCAGACCTACGCGGTTGTGCCGTTTAAACACAAGAACAATGCGCTGGCCCGCGTCTTGTCGACCCGCTCGGCCGACGCCGTCATCGTCTTTGTGCGCACGCGACTGGATGCTGAAGAGATTTCACTGGATCTGACGGCTCGAGGTTTCCGCGCGGCCGGAATTTCCGGCGATGTGGCACAGCAGGAACGTGAGCGCATGGTGGAGCGTCTGCGGTCCGGTTCTTTGGACGTTCTGGTTGCCACCGATGTGGCGGCCCGAGGCCTGGACGTGGAGCGGATCGGCCTGGTCGTCAATTTTGATGTGCCACGCGAACCTGAAGCCTACGTCCACCGTATCGGTCGCACCGGGCGCGCCGGCCGCGAAGGCGAATCACTGTCGTTCTTCACTCCTCGCGAGCACTACCGTCTGCGTCGTATCGAAAAACTGACGGGCACTGCGATGGAGGAAGTCCACATCCCCACGCCACAGGCTGTCAGCGAGTTCCGTTCGCGCCATTTCCTCGACATGTTGCCCACGCGTATTGAACGCGGGCAACTCGACATGTTCGAGCAGCTCATCCGCGAGTTCGCAGATGAGCACGCGTGCGATCCACTGATCATCGCCTCAGCAATGCTGGCGCGCACTGTCCATGACAATGGCACGCACGATCACAAGGACCGCCGCTCCGACGGCAAGATTCGCCGCGAGGAAGTCCTCGATGAGAACGGTGAGTTCCTGTCTGCATCTTTCGAAAACGGGCGTGATTCGAAGCCGCTCAAGGGTGGGAAGAACGGTGCCCGCCGGCGCGCCGGCGGCAAGCCGCAGCGTACCCCGATGGGGACGCGCTACCGCATCGAAGTCGGCAAGAAGGACGGCGTCAAGCCTGGATCCATTGTTGGAGCAATCACGGGCGAAGCTCATCTGAAAGGCTCTGATGTGGGCCGTATCGATATTTACCCGACATTCTCACTGGTGGACATCGGCCCGAGCCTGTCCGACGATCAGATGGAAAAACTCGGTAAAGCCCAGGTTGCCGGGCGTACGCTGCGTATCCGTGTTGATGGCGGGCCGCGTTCGCGTGCCACCGATGCAGGACATGTGCGTCGTCCCCGCAGCGGATCGGGTGATCATCACTCGGGACACCGTTTCGGTGCACGCGGCCAGCGCAGGCCTCGCTAA
PROTEIN sequence
Length: 679
VPSQDSAPMSTSDALGLDDVLFHEDDVAQDSDADSEALADGTDDNDHADDVDQDDIDLEDDEDYDGNDDEDDDADDQVNFADLGLPAPLLDTVTAMGFETPTPIQAEAIPALLEARDVVGIAQTGTGKTAAFGLPMLTLIDPKEKDVQAVVLAPTRELALQSADAMEEFAASYRGINIVAVYGGSAYGPQLRALKDGAQIVVGTPGRMIDLIEKGALDLSSVRMLVLDEADEMLRMGFAEDVETIAATVPTQRVTALFSATMPAAIEKVAQTHLHDPLKIAVSEESSTVDTIHQTYAVVPFKHKNNALARVLSTRSADAVIVFVRTRLDAEEISLDLTARGFRAAGISGDVAQQERERMVERLRSGSLDVLVATDVAARGLDVERIGLVVNFDVPREPEAYVHRIGRTGRAGREGESLSFFTPREHYRLRRIEKLTGTAMEEVHIPTPQAVSEFRSRHFLDMLPTRIERGQLDMFEQLIREFADEHACDPLIIASAMLARTVHDNGTHDHKDRRSDGKIRREEVLDENGEFLSASFENGRDSKPLKGGKNGARRRAGGKPQRTPMGTRYRIEVGKKDGVKPGSIVGAITGEAHLKGSDVGRIDIYPTFSLVDIGPSLSDDQMEKLGKAQVAGRTLRIRVDGGPRSRATDAGHVRRPRSGSGDHHSGHRFGARGQRRPR*